Table 1 Recombination rates in ρ = 4Ner (in Morgans per base) and r (in cM/Mb) for all ten T. cacao populations. The Ne (from [35]) used to transform ρ to r for each population is also reported, as are the lower and upper bounds of a 95% confidence interval for mean r
Population | Mean 4Ner | Mean Ne | Mean r (cM/Mb) | Median r (cM/Mb) | L bound (Mean r) | U bound (Mean r) |
|---|---|---|---|---|---|---|
Amelonado | 1.58e-03 | 15,744 | 2.51 | 2.40e-04 | 2.48 | 2.54 |
Contamana | 8.53e-03 | 61,102 | 3.49 | 4.92e-01 | 3.48 | 3.50 |
Criollo | 1.46e-04 | 695 | 525 | 427 | 523 | 527 |
Curaray | 1.04e-04 | 58,213 | 4.45 | 1.78 | 4.44 | 4.46 |
Guianna | 8.66e-03 | 4651 | 46.5 | 7.74e-01 | 46.3 | 46.7 |
Iquitos | 4.23e-03 | 49,984 | 2.11 | 5.88e-04 | 2.10 | 2.12 |
Maranon | 4.09e-03 | 34,037 | 3.01 | 1.64e-03 | 2.99 | 3.02 |
Nacional | 4.66e-03 | 26,060 | 4.47 | 9.76e-03 | 4.44 | 4.49 |
Nanay | 6.82e-03 | 42,429 | 4.02 | 1.51e-02 | 4.00 | 4.04 |
Purus | 5.95e-03 | 17,357 | 8.57 | 7.74e-01 | 8.54 | 8.60 |