Table 4 The variability of the hypervariable markers and universal chloroplast DNA barcodes
From: Chloroplast genome variation and phylogenetic relationships of Atractylodes species
Markers | Length | Variable sites | information sites | Nucleotide Diversity | ||
|---|---|---|---|---|---|---|
Numbers | % | Numbers | % | |||
rbcL | 1434 | 3 | 0.21 | 0 | 0.00 | 0.0007 |
matK | 1520 | 9 | 0.59 | 1 | 0.07 | 0.0021 |
trnH-psbA | 393 | 3 | 0.76 | 1 | 0.25 | 0.0031 |
rbcL + matK + trnH-psbA | 3347 | 15 | 0.45 | 2 | 0.06 | 0.0016 |
psbM-trnD | 827 | 10 | 1.21 | 1 | 0.12 | 0.0053 |
trnR-trnT | 715 | 10 | 1.40 | 0 | 0.00 | 0.0056 |
trnT-trnL | 921 | 10 | 1.09 | 0 | 0.00 | 0.0050 |
rpl22-rps19-rpl2 | 1105 | 13 | 1.18 | 3 | 0.27 | 0.0066 |
psbM-trnD + trnR-trnT + trnT-trnL + rpl22-rps19-rpl2 | 3568 | 43 | 1.21 | 4 | 0.11 | 0.0042 |