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Table 1 Identification of differentially expressed gene based on transcriptome sequencing

From: Transcriptome sequencing and metabolome analysis of food habits domestication from live prey fish to artificial diets in mandarin fish (Siniperca chuatsi)

Gene name W Expression X-Expression log2FoldChange(X/W) KEGG map Gene function
Phosphatidate phosphatase LPIN1 43.18282 386.1148 3.160501 Glycerolipid metabolism, Glycerophospholipid metabolism, Metabolic pathways, mTOR signaling pathway. Generating 1,2-Diacyl-sn-glycerol
3-keto-steroid reductase-like 1.127324 20.46541 4.182214 Steroid biosynthesis, Steroid hormone biosynthesis, Metabolic pathways. Generating 4alpha-methylzymosterol or Hydroxyestrone
general transcription factor IIF subunit 2 isoform X2 1.302917 25.49286 4.290276 Basal transcription factors. Transcription
sterol-4alpha-carboxylate 3-dehydrogenase 10.80255 140.7436 3.703626 Steroid biosynthesis, Metabolic pathways. Generating 3-Keto-4-methylzymosterol
endothelial lipase 72.61555 753.4305 3.375124 Glycerolipid metabolism, Metabolic pathways. Generating fatty acid
serum/glucocorticoid-regulated kinase 1 1.328233 33.50641 4.656857 mRNA surveillance pathway, cAMP signaling pathway, cGMP-PKG signaling pathway, Oocyte meiosis, Adrenergic signaling in cardiomyocytes, Vascular smooth muscle contraction, Hippo signaling pathway, Focal adhesion, Platelet activation, Long-term potentiation, Dopaminergic synapse, Inflammatory mediator regulation of TRP channels, Regulation of actin cytoskeleton, Insulin signaling pathway, Oxytocin signaling pathway.  
ATP-binding cassette, subfamily C (CFTR/MRP), member 12 1.067294 25.75915 4.593055 ABC transporters.  
stearoyl-CoA desaturase 863.601 10,415.86 3.592273 Biosynthesis of unsaturated fatty acids, Fatty acid metabolism, PPAR signaling pathway, AMPK signaling pathway, Longevity regulating pathway – worm. Fatty acid desaturation
PH domain and leucine-rich repeat-containing protein phosphatase 4.106606 53.87121 3.713496 hospholipase D signaling pathway, Neuroactive ligand-receptor interaction, Glutamatergic synapse  
Retinol dehydrogenase 12 7.270524 99.28454 3.771438 Retinol metabolism, Metabolic pathways Generating all-trans-Retinal
lymphokine-activated killer T-cell-originated protein kinase homolog 6.070951 145.7947 4.585872 Pancreatic secretion, Protein digestion and absorption  
5-phosphohydroxy-L-lysine phospho-lyase 1.974891 34.93728 4.144922 Lysine degradation, Metabolic pathways Generating Allysine
transcription factor CP2-like protein 1 33.3349 1.088583 −4.93651   
serum/glucocorticoid regulated kinase 1 87.45664 1.841215 −5.56984 FoxO signaling pathway, mTOR signaling pathway, PI3K-Akt signaling pathway, Aldosterone-regulated sodium reabsorption  
hypoxia up-regulated 1 135.8593 1.88101 −6.17446 Protein processing in endoplasmic reticulum  
Alcohol dehydrogenase [NADP(+)] A 550.9179 101.9587 −2.43385 Glycolysis / Gluconeogenesis, Pentose and glucuronate interconversions, Glycerolipid metabolism, Metabolic pathways Generating glucuronate, ethanal or D-Glyceraldehyde
Phosphatidate phosphatase LPIN1 230.0628 21.91613 −3.39196 Glycerolipid metabolism, Glycerophospholipid metabolism, Metabolic pathways, mTOR signaling pathway  
Copper-transporting ATPase 2 923.8284 210.7988 −2.13176 Mineral absorption  
calcium/calmodulin-dependent serine protein kinase 55.2038 1.86159 −4.89016 Tight junction  
solute carrier family 2, facilitated glucose transporter member 5 16.81712 0.94255 −4.15722 Carbohydrate digestion and absorption Froctose or glucose absorption
phosphoglycolate phosphatase 15.43525 0.934372 −4.04609 Glyoxylate and dicarboxylate metabolism, Metabolic pathways, Carbon metabolism Generating glycolate
Nuclear receptor coactivator 7 31.91563 1.559127 −4.35545 RNA degradation  
Plasma kallikrein 20,520.24 418.6751 −5.61507 Complement and coagulation cascades  
complement component 2 2119.225 73.06701 −4.85817 Complement and coagulation cascades,  
  1. False Discovery Rate (FDR) ≤ 0.001, Fold Change ≥1.00