From: Consensus module analysis of abdominal fat deposition across multiple broiler lines
Consensus modules | Pathway ID | Description | p-value | Gene count |
---|---|---|---|---|
darkgreen | gga04010 | MAPK signaling pathway | 0.017564 | 6 |
gga03420 | Nucleotide excision repair | 0.037826 | 2 | |
gga03440 | Homologous recombination | 0.037826 | 2 | |
gga00514 | Other types of O-glycan biosynthesis | 0.04737 | 2 | |
green | gga00190 | Oxidative phosphorylation | 1.8E-06 | 22 |
gga01200 | Carbon metabolism | 4.44E-05 | 18 | |
gga03050 | Proteasome | 4.45E-05 | 10 | |
gga00020 | Citrate cycle (TCA cycle) | 0.000212 | 8 | |
gga00480 | Glutathione metabolism | 0.000587 | 10 | |
gga04216 | Ferroptosis | 0.000891 | 8 | |
gga04144 | Endocytosis | 0.000966 | 27 | |
gga00970 | Aminoacyl-tRNA biosynthesis | 0.001063 | 9 | |
gga04141 | Protein processing in endoplasmic reticulum | 0.00317 | 19 | |
gga04146 | Peroxisome | 0.003185 | 12 | |
gga04130 | SNARE interactions in vesicular transport | 0.007734 | 6 | |
gga00563 | Glycosylphosphatidylinositol (GPI)-anchor biosynthesis | 0.009851 | 5 | |
gga00630 | Glyoxylate and dicarboxylate metabolism | 0.010798 | 6 | |
gga00620 | Pyruvate metabolism | 0.012614 | 6 | |
gga03020 | RNA polymerase | 0.014359 | 5 | |
gga00982 | Drug metabolism - cytochrome P450 | 0.019328 | 6 | |
gga00532 | Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate | 0.027023 | 4 | |
gga00980 | Metabolism of xenobiotics by cytochrome P450 | 0.028142 | 6 | |
gga03320 | PPAR signaling pathway | 0.03988 | 8 | |
gga01210 | 2-Oxocarboxylic acid metabolism | 0.042742 | 3 | |
gga00640 | Propanoate metabolism | 0.045424 | 5 | |
mediumpurple3 | gga00100 | Steroid biosynthesis | 2.94E-12 | 7 |
gga00900 | Terpenoid backbone biosynthesis | 4.86E-08 | 5 | |
gga04140 | Autophagy - animal | 0.005787 | 4 | |
gga04136 | Autophagy - other | 0.011041 | 2 | |
gga00071 | Fatty acid degradation | 0.01515 | 2 | |
gga01212 | Fatty acid metabolism | 0.036839 | 2 | |
gga04137 | Mitophagy - animal | 0.047564 | 2 | |
purple | gga00534 | Glycosaminoglycan biosynthesis - heparan sulfate / heparin | 0.00728 | 3 |
gga00561 | Glycerolipid metabolism | 0.018023 | 4 | |
gga00051 | Fructose and mannose metabolism | 0.020612 | 3 | |
gga00564 | Glycerophospholipid metabolism | 0.021563 | 5 | |
gga04920 | Adipocytokine signaling pathway | 0.022325 | 4 | |
gga00260 | Glycine, serine and threonine metabolism | 0.023889 | 3 | |
gga00532 | Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate | 0.040008 | 2 | |
gga04141 | Protein processing in endoplasmic reticulum | 0.046056 | 6 | |
gga00520 | Amino sugar and nucleotide sugar metabolism | 0.046627 | 3 | |
saddlebrown | gga00190 | Oxidative phosphorylation | 0.001016 | 6 |
gga04910 | Insulin signaling pathway | 0.001322 | 6 | |
gga04261 | Adrenergic signaling in cardiomyocytes | 0.008768 | 5 | |
gga04744 | Phototransduction | 0.022229 | 2 | |
gga00860 | Porphyrin and chlorophyll metabolism | 0.026023 | 2 | |
gga04270 | Vascular smooth muscle contraction | 0.03332 | 4 | |
gga04371 | Apelin signaling pathway | 0.034198 | 4 | |
gga04130 | SNARE interactions in vesicular transport | 0.034327 | 2 | |
gga03015 | mRNA surveillance pathway | 0.039714 | 3 | |
gga04120 | Ubiquitin mediated proteolysis | 0.04475 | 4 | |
skyblue | gga05164 | Influenza A | 1.06E-05 | 8 |
gga05168 | Herpes simplex virus 1 infection | 0.001127 | 6 | |
gga04622 | RIG-I-like receptor signaling pathway | 0.01011 | 3 | |
gga03440 | Homologous recombination | 0.036151 | 2 | |
gga04623 | Cytosolic DNA-sensing pathway | 0.047223 | 2 | |
turquoise | gga03018 | RNA degradation | 0.000639 | 18 |
gga04070 | Phosphatidylinositol signaling system | 0.000808 | 21 | |
gga00562 | Inositol phosphate metabolism | 0.01109 | 15 | |
gga04010 | MAPK signaling pathway | 0.011485 | 42 | |
gga04340 | Hedgehog signaling pathway | 0.017356 | 10 | |
gga04912 | GnRH signaling pathway | 0.026294 | 16 | |
gga00051 | Fructose and mannose metabolism | 0.039864 | 8 | |
gga00600 | Sphingolipid metabolism | 0.04698 | 10 | |
yellow | gga04141 | Protein processing in endoplasmic reticulum | 0.000926 | 20 |
gga05132 | Salmonella infection | 0.001751 | 26 | |
gga04142 | Lysosome | 0.00193 | 16 | |
gga00532 | Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate | 0.004474 | 5 | |
gga00510 | N-Glycan biosynthesis | 0.023771 | 7 | |
gga04137 | Mitophagy - animal | 0.028998 | 8 | |
gga01212 | Fatty acid metabolism | 0.038571 | 7 | |
gga04070 | Phosphatidylinositol signaling system | 0.040766 | 10 |