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Table 1 Total read numbers throughout the filtering process. Raw (raw data after downloading), Clipped (remaining reads after removing adaptors and reads shorter than 17 nt), Filtered (remaining reads after filtering by read quality) and Sized (remaining reads after removing sequences longer than 26 nt)

From: Integrative microRNAome analysis of skeletal muscle of Colossoma macropomum (tambaqui), Piaractus mesopotamicus (pacu), and the hybrid tambacu, based on next-generation sequencing data

Samples

Counts

Overall Remaining (%)

Raw

Clipped

Filtered

Sized

PC

57,376,715

42,480,101

39,296,309

30,132,774

52,52

TC

55,492,134

42,720,612

39,513,638

29,310,231

52,82

TQ

48,058,874

36,611,767

33,906,594

24,038,384

50,02

     

51,78