Skip to main content

Table 3 Variants segregating among 161 BSW samples

From: Investigating the impact of reference assembly choice on genomic analyses in a cattle breed

 

ARS-UCD1.2

UOA_Angus_1

Non-fixed variants (per Kb)

22,488,261 (9.03)

22,289,905 (9.03)

Non-fixed SNPs (per Kb)

19,557,039 (7.86)

19,446,648 (7.88)

Non-fixed INDELs (per Kb)

2,931,222 (1.18)

2,843,257 (1.15)

  1. Number of high-quality non-fixed variants discovered after aligning the samples to ARS-UCD1.2 and UOA_Angus_1 assemblies. Numbers in parentheses reflect the variant density (number of variants per Kb) along the autosomes
Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us