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Fig. 1 | BMC Genomics

Fig. 1

From: RNA sequencing describes both population structure and plasticity-selection dynamics in a non-model fish

Fig. 1

Principal component analysis of microsatellites, neutral SNPs from RNA, and overall SNPs from RNA for two populations of Sacramento splittail (Pogonichthys macrolepidotus). The Central Valley population represents an overall larger, less salinity-tolerant group than the San Pablo Bay population. Microsatellite data for the Central Valley population (n = 528) and the San Pablo population (n = 191) individuals, and are comprised of 19 markers with at least 80% present data, filtered for family structure where full-siblings were removed. Neutral and overall single nucleotide polymorphisms (SNPs) were generated with mRNA sequencing data of 32 fish (n = 16 per population). There were a total of 420,626 overall SNPs and 69,951 neutral SNPs after filtering used in the principal components analyses

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BMC Genomics

ISSN: 1471-2164

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