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Table 2 Parameter settings of different algorithms

From: Protein functional module identification method combining topological features and gene expression data

Algorithm

Parameter

ClusterONE

s=3, density=auto(default setting)

DPClus

CPin=0.5, din=0.6(default setting)

COACH

W=0.225(default setting)

CFinder

k=3

MCL

inflation=1.8(default setting)

ECTG

α=0.8,λ=0.7/0.8,OvMax=0.7/0.8/0.9