Table 3 List of notated genes within a 1-Mb window of significantly associated CNV segments
From: Genome-wide detection of CNVs and their association with performance traits in broilers
GGA: first-last positiona | Associated trait (s)b | Gene Name (Aliases) | Ensembl Gene IDc | Entrezgene IDd |
|---|---|---|---|---|
3: 64169030–64171297 | BWG | RFX6 | ENSGALG00000014918 | 421737 |
GPRC6A | ENSGALG00000014925 | 428620 | ||
FAM162B | ENSGALG00000019941 | 100857953 | ||
KPNA5 | ENSGALG00000014937 | 421738 | ||
ZUFSP (ZUP1) | ENSGALG00000014940 | 421739 | ||
SOT3A1L | ENSGALG00000014950 | 421740 | ||
RWDD1 | ENSGALG00000014953 | 421741 | ||
FAM26D (CALHM4) | ENSGALG00000014955 | 421742 | ||
TRAPPC3L | ENSGALG00000028539 | 421743 | ||
FAM26E (CALHM5) | ENSGALG00000038162 | 769904 | ||
FAM26F (CALHM6) | ENSGALG00000014962 | 421744 | ||
DSE | ENSGALG00000014963 | 421745 | ||
NT5DC1 | ENSGALG00000014964 | 421746 | ||
COL10A1 | ENSGALG00000014965 | 100858979 | ||
FRK | ENSGALG00000014979 | 421747 | ||
HS3ST5 | ENSGALG00000026594 | 428621 | ||
3: 97801202–97809208 | BW35, BW41, BW42 | GREB1 | ENSGALG00000016455 | 421944 |
LPIN1 | ENSGALG00000016456 | 421945 | ||
TRIB2 | ENSGALG00000016457 | 378919 | ||
5: 12059966–12062666 | BW | SOX6 | ENSGALG00000006074 | 423068 |
C5H11orf58 | ENSGALG00000006077 | 395520 | ||
PLEKHA7 | ENSGALG00000029679 | 423069 | ||
RPS13 | ENSGALG00000006096 | 414782 | ||
PIK3C2A | ENSGALG00000006121 | 423070 | ||
NUCB2 | ENSGALG00000006147 | 423071 | ||
KCNJ11 | ENSGALG00000020505 | 428846 | ||
ABCC8 | ENSGALG00000006172 | 423072 | ||
USH1C | ENSGALG00000006192 | 423073 | ||
FTL | ENSGALG00000028696 | 378899 | ||
MYOD1 | ENSGALG00000006216 | 374048 | ||
KCNC1 | ENSGALG00000006220 | 423076 | ||
SERGEF | ENSGALG00000006231 | 423077 |