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Fig. 5 | BMC Genomics

Fig. 5

From: TarDB: an online database for plant miRNA targets and miRNA-triggered phased siRNAs

Fig. 5

PhasiRNAs are enriched on chromosome 4. a, b Genomic distributions of miR2118 and miR2275 triggered phasiRNA loci in Brachypodium distachyon. The number of phasiRNA loci (phasiRNA density) is represented in color scale. Arrows indicated phasiRNA enriched genomic regions. c Screenshot of “Search Locus” interface. d The phasiRNAs produced at the locus Chr4:11539101–11,540,181(−) are likely to be triggered by miR2275 and miR5174 in “two-hit” mode. Genomic Watson and Crick strands are shown in red and blue colors, respectively. The grey lines in phasing score plot mark the 24-nt intervals

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