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Fig. 2 | BMC Genomics

Fig. 2

From: A comprehensive RNA-Seq-based gene expression atlas of the summer squash (Cucurbita pepo) provides insights into fruit morphology and ripening mechanisms

Fig. 2

a Violin plot of the distribution of the gene expression in tissues. b Principal component analysis based on the expression levels of the various tissues. c Venn diagram showing the number of shared expressed genes (FPKM > 1) between different tissues or groups of tissues. Flower: female flower + male flower; Fruit at 2DAP, 7DAP, 10DAP, 15DAP, 20DAP, 30DAP, and Ripe fruit (40DAP); Root: lateral root and primary root; Vegetative: developed leaf, young leaf, stem and shoot. d Heatmap of the top 1000 genes with the highest expression variability. The color key represents normalized log2 FPKM. The top dendrogram shows the relationships among tissues and the side dendrogram relationships among genes

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BMC Genomics

ISSN: 1471-2164

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