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Table 4 Summary of trimming and read mapping results

From: Transcriptome analysis of ovary tissues from low- and high-yielding Changshun green-shell laying hens

Samp

Total reads

Total mapped

Multiple mapped

Uniquely mapped

LP-1

45,672,822

41,835,034 (91.60 %)

1,582,978 (3.47 %)

40,252,056 (88.13 %)

LP-2

45,890,650

41,787,491 (91.06 %)

1,616,242 (3.52 %)

40,171,249 (87.54 %)

LP-3

45,755,138

41,901,902 (91.58 %)

1,585,544 (3.47 %)

40,316,358 (88.11 %)

LP-4

43,023,412

39,740,455 (92.37 %)

1,496,311 (3.48 %)

38,244,144 (88.89 %)

HP-1

47,511,052

42,941,478 (90.38 %)

1,803,134 (3.80 %)

41,138,344 (86.59 %)

HP-2

39,090,800

35,970,409 (92.02 %)

1,342,878 (3.44 %)

34,627,531 (88.58 %)

HP-3

41,943,412

38,492,966 (91.77 %)

1,432,361 (3.41 %)

37,060,605 (88.36 %)

HP-4

44,654,676

41,115,072 (92.07 %)

1,619,095 (3.63 %)

39,495,977 (88.45 %)

  1. Samp Sample name; LP low egg production group; HP high egg production group