Skip to main content

Table 8 AUGUSTUS results showing one sequence from both the up- and the downregulated list of sequences that did not have BLAST results. The table shows the length of the sequence, the start and stop positions of the predicted open reading frame (ORF) coding region and the potential protein sequence

From: Functional prediction of de novo uni-genes from chicken transcriptomic data following infectious bursal disease virus at 3-days post-infection

Uni-gene

Length

Start

Stop

Amino Acid Sequence

1_CL12Contig16 (upregulated)

588

1

501

MALQRSMKAEEEEEEEEEEAQLAMALQRSIREKEKEEEEEEVRLVMTLQRSIKEKEKEEEEEEVRLAMALQRSMKEEEEEEEEEEEAQLAMALQRSIREKKEEEEEEEEAQLAMALQRSMKEEEEEEEKEVQLAMALQRSMKEEEEEEEEEEEAQLAMALQRSIREK

1_CL2484Contig1 (downregulated)

484

1

409

GGGEEEEEEEEEEEEEGYEQPDSDSNTDGYENEGGAAPSQSSAGSYENDPNSTPASDGPPTPTDPTVLSPGAANLITGLQRALLAAQRWDGRSDGSAGSQPYEEMGGTKRAALRRDGTEDDAGSYENMAGAELTP