Table 1 Data statistics in RPGD database
Data type | Number |
|---|---|
Gene | |
 Genes for R. delavayi | 32,938 |
 Genes for R. williamsianum | 23,559 |
 Genes for R. simsii | 32,999 |
Genome | |
 Scaffolds for R. delavayi | 193,091 |
 Chromosomes for R. williamsianum | 13 |
 Chromosomes for R. simsii | 13 |
Gene ontology (GO) | |
 R. delavayi |  |
  Genes | 21,361 |
  Annotations | 805,276 |
 R. williamsianum | |
  Gene | 17,658 |
  Annotations | 687,600 |
 R. simsii | |
  Genes | 22,235 |
  Annotations | 785,704 |
Gene Family | |
 Gene families for R. delavayi | 4168 |
 Gene families for R. williamsianum | 3546 |
 Gene families for R. simsii | 3742 |
Transcription factor (TF) and Transcriptional regulators (TRs) | Â |
 TFs and TRs for R. delavayi | 2104 |
 TFs and TRs for R. williamsianum | 1622 |
 TFs and TRs for R. simsii | 2156 |
Simple sequence repeat (SSR) | Â |
 SSRs for R. delavayi | 361,268 |
 SSRs for R. williamsianum | 230,013 |
 SSRs for R. simsii | 358,705 |
Chloroplast genome assemblies | Â |
 R. delavayi chloroplast genome assembly | 2 |
 R. pulchrum chloroplast genome assembly | 1 |
InterPro | |
 Annotated to InterPro for R. delavayi | 77,221 |
 Annotated to InterPro for R. williamsianum | 60,834 |
 Annotated to InterPro for R. simsii | 81,654 |
Gene expression | |
 RNA-Seq for R. delavayi | 2 |
Genomic synteny | 2913 |
OrthoFinder orthologous/paralogs group | 18,048 |