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Table 1 Top ten species in three sample types by BGISEQ-500

From: Metagenomic diagnosis of severe psittacosis using multiple sequencing platforms

Top ten species Number of unique reads(n)
BALF Sputum Blood
Chlamydia psittacia 39,385 30,320 14,478
Propionibacterium acnesa 64 59 171
Stenotrophomonas maltophiliaa 54 102 150
Chlamydia abortus 46 23 /
Klebsiella pneumoniaea 29 22 24
Salmonella entericaa 27 56 43
Pseudomonas aeruginosaa 20 16 29
Moraxella osloensisa 17 9 26
Micrococcus luteus 10 8 /
Escherichia colia 8 10 50
Enterococcus faecium / / 11
Staphylococcus epidermidis / / 11
  1. aindicates species that were detected in all three sample types. “/” indicates species that were not among the top ten species of the corresponding sample