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Table 2 Summary of ARPEGGIO’s downstream analyses on the dataset from Edger and colleagues. The table is divided in two parts, one per progenitor. For each progenitor, the table shows the number of differentially methylated regions (DMRs) for each context, the number of genes overlapping with DMRs and the total number of genes found over all contexts

From: ARPEGGIO: Automated Reproducible Polyploid EpiGenetic GuIdance workflOw

Methylation context

Mimulus guttatus

Mimulus luteus

CG

CHG

CHH

CG

CHG

CHH

DMRs

65

126

23

277

211

58

Total DMRs

214

546

Genes overlapping DMRs

13

20

2

2

0

0

Total genes

35

2