Skip to main content

Table 1 Assembly and annotation summary statistics of the red form of T. urticae

From: Comparative genome and transcriptome analyses reveal innate differences in response to host plants by two color forms of the two-spotted spider mite Tetranychus urticae

 

T. urticae (red)

Total scaffold number

144

Total scaffold length (Mb)

90.11

Scaffold N50 length (Mb)

12.78

Scaffold N90 length (Mb)

3.82

Longest length of scaffold (Mb)

22.75

GC (%)

32.33

Assembly BUSCO (%)

 C

92.2

 S

87.1

 D

5.1

 F

1.2

 M

6.5

Mapping rate (%)

 RNA-seq data

96.61

 Illumina data

96.95

 PacBio data

92.76

Gene annotations (number/length)

 Genes

11,917

 Gene mean length (bp)

3891.9

 CDSs

11,917

 CDS mean length (bp)

1487.2

 Exons

47,355

 Exon mean length (bp)

600.1

 Introns

31,730

 Intron mean length (bp)

565.67