Fig. 6

Haplotype networks for (A) mitogenome variants of RcerHB (HT1a), RcerIZ (HT1a) and RcerAS (HT2) and Wolbachia strains wCer1, wCer2 and wCer5, and (B) wCer2 variants between RcerAS and three novel host lineages (Ccap88.6, DsimRC45 and DsimRC50) infected by embryonic microinjection. Numbers (in parentheses) next to solid lines indicate SNPs between the mitogenome variants, and numbers (in parentheses) next to broken lines SNPs between the Wolbachia strain genome variants. Input alignments were based on library-specific consensus genomes (Additional Files 7, 8 and 9) determined by majority rule (nucleotide called when > 50% of mapped reads). wCer4 was not included in this analysis because only one genome variant was sequenced