Fig. 1

Library construction and sequencing for transcriptome and translatome profiling of ‘Nipponbare’ (NB) and ‘Sea Rice 86’ (SR86). a Schematic illustration for the construction of RNA-seq and ribo-seq libraries. b Clustering analysis of translatomic datasets from NB under normal (0 h) and salt stress (24 h) conditions. c Clustering analysis of translatomic datasets from SR86 under normal (0 h) and salt stress (24 h) conditions. The three biological repeats are represented by “rep 1”, “rep 2” and “rep 3”. The color schemes indicate Euclidean distances between samples measured by DESeq2-normalized read counts. d Metagene analysis of RPFs from NB and SR86 under normal (0 h) and salt stress (24 h) conditions. Lines at positions of frame 0 (the main frame based on the annotated start codon), 1 and 2 are colored in purple, cyan and orange, respectively