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Table 1 Summary of SMRT-Seq dataset

From: Transcriptomic analysis to elucidate the effects of high stocking density on grass carp (Ctenopharyngodon idella)

Category Dataset
Subreads base (G) 31.04
Subreads number 17,422,835
Average subreads length 1,782
Subreads N50 2,583
CCS 462,629
5’-primer 436,445
3’-primer 436,247
Poly-A 415,941
Full length 391,501
FLNC 385,367
Average FLNC read length 2,733
Polished consensus reads 220,474
Average consensus reads length 2,906
Polished N50 3,867
Total reads 220,474
Mapped polished consensus reads 185,869(84.3 %)
High-quality isoforms number 79,148
Isoform mean length 2,612
Isoform N50 3,261
Isoforms of known genes 1,999(2.5 %)
Novel isoform of known genes 53,448(67.5 %)
Isoforms of novel genes 23,701(29.9 %)
New genes number 18,827