Skip to main content

Table 2 Detected QTL for deoxynivalenol production in wheat (DON-WH), aggressiveness in wheat (AGG-WH) and rye (AGG-RYE)

From: Genome-wide association study for deoxynivalenol production and aggressiveness in wheat and rye head blight by resequencing 92 isolates of Fusarium culmorum

Trait Marker Chr.a Position p value pGa α-Effecta
(bp) Combined Single
DON- FC1_1332589 I 1,332,589 6.75E-05 1.39 11.50 − 2.26
WH FC1_7462132 I 7,462,132 6.64E-06 3.44 27.02 −3.02
  FC1_7624829 I 7,624,829 4.57E-05 0.57 25.50 −3.19
  FC1_7634754 I 7,634,754 5.78E-05 0.72 21.13 −3.29
  FC1_8372372 I 8,372,372 3.73E-05 0.22 27.96 −3.23
  FC1_11609824 I 11,609,824 1.76E-05 0.59 35.77 −4.00
  FC2_497121 II 497,121 6.52E-05 4.60 18.36 −2.13
  FC2_4071753 II 4,071,753 2.76E-05 3.57 40.39 −4.01
  FC2_4592052 II 4,592,052 2.65E-06 4.24 29.98 −2.65
  FC2_5570470 II 5,570,470 5.94E-07 0.46 28.64 −2.71
  FC2_5574549 II 5,574,549 2.51E-05 0.50 33.11 −4.02
  FC2_5575822 II 5,575,822 8.24E-05 0.47 20.05 −2.74
  FC2_5593616 II 5,593,616 7.90E-09 48.35 48.35 −4.39
  FC2_5761776 II 5,761,776 2.99E-05 2.15 21.33 −3.01
  FC2_6904196 II 6,904,196 5.18E-07 1.03 23.92 −3.14
  FC2_7111625 II 7,111,625 6.23E-05 0.33 21.17 −2.52
  FC2_8319916 II 8,319,916 2.03E-05 0.01 23.67 −2.93
  FC2_8367818 II 8,367,818 1.63E-05 0.27 20 −2.47
  FC2_8496198 II 8,496,198 1.01E-05 1.43 26.4 −2.48
  FC3_605481 III 605,481 2.97E-05 0.71 33.3 −3.75
  FC3_1553327 III 1,553,327 1.83E-06 0.86 24.36 −2.75
  FC3_6685196 III 6,685,196 3.84E-05 1.54 25.26 −3.31
  FC3_6792804 III 6,792,804 4.48E-07 3.37 34.66 −4.15
  FC3_7355239 III 7,355,239 1.35E-05 0.46 31.03 −3.57
  FC3_7367207 III 7,367,207 2.20E-05 0.13 25.66 −2.44
  FC4_4553334 IV 4,553,334 4.09E-05 0.13 30.47 −2.64
  FC4_4911411 IV 4,911,411 3.38E-05 1.59 18.03 −2.31
  Total     70.37   
AGG- FC1_1332589 I 1,332,589 2.14E-05 0.14 13.01 −1.47
WH FC1_7462132 I 7,462,132 3.40E-05 1.99 23.62 −1.76
  FC1_7863082 I 7,863,082 5.56E-05 0.29 20.96 −1.87
  FC1_8372372 I 8,372,372 9.89E-05 0.39 23.17 −1.84
  FC2_5279785 II 5,279,785 8.92E-05 0.01 13.87 −1.58
  FC2_5570470 II 5,570,470 8.74E-05 0.64 16.81 −1.37
  FC2_5593616 II 5,593,616 9.50E-06 1.33 29.70 −2.27
  FC2_5720089 II 5,720,089 5.84E-05 0.11 18.94 −1.86
  FC2_5761776 II 5,761,776 2.41E-07 33.38 33.26 −2.12
  FC2_5762236 II 5,762,236 1.69E-05 0.01 26.90 −1.56
  FC2_6904196 II 6,904,196 2.84E-06 12.30 23.28 −2.00
  FC3_605481 III 605,481 2.76E-05 0.50 25.66 −2.11
  FC3_720389 III 720,389 7.37E-05 0.62 27.62 −1.92
  FC3_6685196 III 6,685,196 8.29E-05 0.01 15.15 −1.63
  FC3_7344552 III 7,344,552 7.77E-06 5.72 31.48 −2.29
  FC4_1464595 IV 1,464,595 7.26E-05 1.50 15.85 −1.56
  FC4_3857293 IV 3,857,293 3.30E-05 3.59 23.33 −2.03
  FC4_4553334 IV 4,553,334 5.12E-05 1.90 27.54 −1.58
  FC4_6994632 IV 6,994,632 3.93E-05 1.89 18.85 −1.41
  FC4_7436319 IV 7,436,319 6.80E-05 1.07 19.75 −1.87
  Total     53.31   
AGG- FC1_7624829 I 7,624,829 4.05E-05 17.18 17.69 −2.98
RYE FC3_6792804 III 6,792,804 5.52E-05 5.66 18.03 −3.26
  Total     21.40   
  1. aChr. Chromosome, pG proportion of genotypic variance explained by the QTL in percentage in a combined and single analysis, α-Effect allele substitution effect