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Table 2 Detected QTL for deoxynivalenol production in wheat (DON-WH), aggressiveness in wheat (AGG-WH) and rye (AGG-RYE)

From: Genome-wide association study for deoxynivalenol production and aggressiveness in wheat and rye head blight by resequencing 92 isolates of Fusarium culmorum

Trait

Marker

Chr.a

Position

p value

pGa

α-Effecta

(bp)

Combined

Single

DON-

FC1_1332589

I

1,332,589

6.75E-05

1.39

11.50

− 2.26

WH

FC1_7462132

I

7,462,132

6.64E-06

3.44

27.02

−3.02

 

FC1_7624829

I

7,624,829

4.57E-05

0.57

25.50

−3.19

 

FC1_7634754

I

7,634,754

5.78E-05

0.72

21.13

−3.29

 

FC1_8372372

I

8,372,372

3.73E-05

0.22

27.96

−3.23

 

FC1_11609824

I

11,609,824

1.76E-05

0.59

35.77

−4.00

 

FC2_497121

II

497,121

6.52E-05

4.60

18.36

−2.13

 

FC2_4071753

II

4,071,753

2.76E-05

3.57

40.39

−4.01

 

FC2_4592052

II

4,592,052

2.65E-06

4.24

29.98

−2.65

 

FC2_5570470

II

5,570,470

5.94E-07

0.46

28.64

−2.71

 

FC2_5574549

II

5,574,549

2.51E-05

0.50

33.11

−4.02

 

FC2_5575822

II

5,575,822

8.24E-05

0.47

20.05

−2.74

 

FC2_5593616

II

5,593,616

7.90E-09

48.35

48.35

−4.39

 

FC2_5761776

II

5,761,776

2.99E-05

2.15

21.33

−3.01

 

FC2_6904196

II

6,904,196

5.18E-07

1.03

23.92

−3.14

 

FC2_7111625

II

7,111,625

6.23E-05

0.33

21.17

−2.52

 

FC2_8319916

II

8,319,916

2.03E-05

0.01

23.67

−2.93

 

FC2_8367818

II

8,367,818

1.63E-05

0.27

20

−2.47

 

FC2_8496198

II

8,496,198

1.01E-05

1.43

26.4

−2.48

 

FC3_605481

III

605,481

2.97E-05

0.71

33.3

−3.75

 

FC3_1553327

III

1,553,327

1.83E-06

0.86

24.36

−2.75

 

FC3_6685196

III

6,685,196

3.84E-05

1.54

25.26

−3.31

 

FC3_6792804

III

6,792,804

4.48E-07

3.37

34.66

−4.15

 

FC3_7355239

III

7,355,239

1.35E-05

0.46

31.03

−3.57

 

FC3_7367207

III

7,367,207

2.20E-05

0.13

25.66

−2.44

 

FC4_4553334

IV

4,553,334

4.09E-05

0.13

30.47

−2.64

 

FC4_4911411

IV

4,911,411

3.38E-05

1.59

18.03

−2.31

 

Total

   

70.37

  

AGG-

FC1_1332589

I

1,332,589

2.14E-05

0.14

13.01

−1.47

WH

FC1_7462132

I

7,462,132

3.40E-05

1.99

23.62

−1.76

 

FC1_7863082

I

7,863,082

5.56E-05

0.29

20.96

−1.87

 

FC1_8372372

I

8,372,372

9.89E-05

0.39

23.17

−1.84

 

FC2_5279785

II

5,279,785

8.92E-05

0.01

13.87

−1.58

 

FC2_5570470

II

5,570,470

8.74E-05

0.64

16.81

−1.37

 

FC2_5593616

II

5,593,616

9.50E-06

1.33

29.70

−2.27

 

FC2_5720089

II

5,720,089

5.84E-05

0.11

18.94

−1.86

 

FC2_5761776

II

5,761,776

2.41E-07

33.38

33.26

−2.12

 

FC2_5762236

II

5,762,236

1.69E-05

0.01

26.90

−1.56

 

FC2_6904196

II

6,904,196

2.84E-06

12.30

23.28

−2.00

 

FC3_605481

III

605,481

2.76E-05

0.50

25.66

−2.11

 

FC3_720389

III

720,389

7.37E-05

0.62

27.62

−1.92

 

FC3_6685196

III

6,685,196

8.29E-05

0.01

15.15

−1.63

 

FC3_7344552

III

7,344,552

7.77E-06

5.72

31.48

−2.29

 

FC4_1464595

IV

1,464,595

7.26E-05

1.50

15.85

−1.56

 

FC4_3857293

IV

3,857,293

3.30E-05

3.59

23.33

−2.03

 

FC4_4553334

IV

4,553,334

5.12E-05

1.90

27.54

−1.58

 

FC4_6994632

IV

6,994,632

3.93E-05

1.89

18.85

−1.41

 

FC4_7436319

IV

7,436,319

6.80E-05

1.07

19.75

−1.87

 

Total

   

53.31

  

AGG-

FC1_7624829

I

7,624,829

4.05E-05

17.18

17.69

−2.98

RYE

FC3_6792804

III

6,792,804

5.52E-05

5.66

18.03

−3.26

 

Total

   

21.40

  
  1. aChr. Chromosome, pG proportion of genotypic variance explained by the QTL in percentage in a combined and single analysis, α-Effect allele substitution effect