Table 1 Comparison of genome assembly stats of Claviceps paspali isolates
Category | ILB388 | ILB432 | RRC-1481 |
|---|---|---|---|
Estimated genome size (Mb) | 29.2 | 28.9 | 28.9 |
GC content (%) | 49.4 | 47.8 | 48.0 |
No. of contigs | 885 | 701 | 2304 |
N50 of contigs | 89,397 | 79,562 | 26,898 |
No. of scaffolds (> 200 bp) | 586 | 352 | n/s |
Total length of scaffolds (bp) | 29,270,071 | 28,980,376 | n/s |
N50 of scaffolds (bp) | 196,155 | 146,886 | n/s |
Longest scaffolds (bp) | 734,927 | 616,281 | n/s |
No. N’s per 100 kb | 21.0 | 23.0 | 0.8 |
BUSCO analysis | 98.4(S),0.0(D),0.5(F),1.1(M) | 98.7%(S),0.0%(D),0.1%(F),1.2%(M) | 96.9(S),0.0(D),1.2(F),1.9(M) |
Repeat sequences (%) | 23.00 | 22.34 | 22.39 |