Table 1 List of the 104 AP2/ERF genes identified in Liriodendron Chinense
Gene name | Gene ID | Location | Protein length (aa) | Introns | Family group |
|---|---|---|---|---|---|
LcERF1 | Unigene40981_All | Scaffold211 | 261 | 0 | I |
LcERF2 | Lchi03057 | Scaffold506 | 328 | 1 | I |
LcERF3 | Lchi07965 | Scaffold708 | 325 | 1 | I |
LcERF4 | Lchi07966 | Scaffold708 | 561 | 2 | I |
LcERF5 | Lchi22931 | Scaffold1519 | 432 | 1 | I |
LcERF6 | Lchi09796 | Scaffold2048 | 316 | 1 | I |
LcERF7 | Lchi16995 | Scaffold3097 | 316 | 0 | I |
LcERF8 | Lchi23250 | Scaffold142 | 152 | 0 | II |
LcERF9 | Lchi16170 | Scaffold408 | 193 | 1 | II |
LcERF10 | Unigene12650_All | Scaffold416 | 188 | 0 | II |
LcERF11 | Lchi16911 | Scaffold480 | 199 | 1 | II |
LcERF12 | Unigene40401_All | Scaffold525 | 185 | 0 | II |
LcERF13 | Unigene20830_All | Scaffold836 | 186 | 0 | II |
LcERF14 | Lchi11957 | Scaffold345 | 224 | 1 | III |
LcERF15 | Lchi04946 | Scaffold530 | 235 | 1 | III |
LcERF16 | Lchi04947 | Scaffold530 | 295 | 1 | III |
LcERF17 | CL2522.Contig2_All | Scaffold530 | 223 | 0 | III |
LcERF18 | CL10877.Contig3_All | Scaffold530 | 223 | 0 | III |
LcERF19 | Unigene6126_All | Scaffold530 | 211 | 0 | III |
LcERF20 | Lchi33109 | Scaffold1203 | 229 | 1 | III |
LcERF21 | Lchi33111 | Scaffold1203 | 227 | 1 | III |
LcERF22 | Lchi34895 | Scaffold1374 | 513 | 4 | III |
LcERF23 | Lchi29925 | Scaffold1675 | 425 | 3 | III |
LcERF24 | Lchi08587 | Scaffold39 | 420 | 1 | III |
LcERF25 | CL5589.Contig2_All | Scaffold345 | 203 | 0 | III |
LcERF26 | Unigene11386_All | Scaffold432 | 211 | 0 | III |
LcERF27 | CL5589.Contig1_All | Scaffold530 | 246 | 0 | III |
LcERF28 | Lchi00950 | Scaffold723 | 217 | 0 | III |
LcERF29 | Lchi01616 | Scaffold1191 | 100 | 1 | III |
LcERF30 | Unigene5530_All | Scaffold1191 | 252 | 0 | III |
LcERF31 | Lchi32377 | Scaffold1289 | 210 | 0 | III |
LcERF32 | Lchi26370 | Scaffold1364 | 193 | 1 | III |
LcERF33 | Lchi08922 | Scaffold3419 | 244 | 0 | III |
LcERF34 | Lchi28169 | Scaffold654 | 418 | 1 | IV |
LcERF35 | Lchi23878 | Scaffold1043 | 141 | 0 | IV |
LcERF36 | Lchi22387 | Scaffold1263 | 229 | 1 | IV |
LcERF37 | Lchi13652 | Scaffold1315 | 429 | 1 | IV |
LcERF38 | Lchi30363 | Scaffold2365 | 475 | 3 | IV |
LcERF39 | Lchi30365 | Scaffold2365 | 354 | 1 | IV |
LcERF40 | Lchi31374 | Scaffold3032 | 404 | 1 | IV |
LcERF41 | Lchi34724 | Scaffold3708 | 355 | 1 | IV |
LcERF42 | Lchi10868 | Scaffold159 | 758 | 2 | V |
LcERF43 | Lchi11945 | Scaffold345 | 421 | 7 | V |
LcERF44 | Lchi25937 | Scaffold1371 | 183 | 1 | V |
LcERF45 | Lchi16637 | Scaffold2432 | 226 | 1 | V |
LcERF46 | Lchi34468 | Scaffold2926 | 206 | 1 | V |
LcERF47 | Lchi05084 | Scaffold3476 | 136 | 1 | V |
LcERF48 | Lchi07311 | Scaffold172 | 268 | 0 | VI |
LcERF49 | Lchi22103 | Scaffold920 | 369 | 2 | VI |
LcERF50 | Lchi17039 | Scaffold3097 | 359 | 1 | VI |
LcERF51 | Lchi02638 | Scaffold416 | 310 | 1 | VII |
LcERF52 | Lchi02639 | Scaffold416 | 362 | 1 | VII |
LcERF53 | Lchi11452 | Scaffold525 | 383 | 1 | VII |
LcERF54 | Lchi04620 | Scaffold775 | 290 | 1 | VII |
LcERF55 | Lchi04621 | Scaffold775 | 289 | 1 | VII |
LcERF56 | Lchi04623 | Scaffold775 | 236 | 1 | VII |
LcERF57 | Lchi07083 | Scaffold135 | 273 | 1 | VIII |
LcERF58 | Lchi07084 | Scaffold135 | 203 | 0 | VIII |
LcERF59 | Lchi13371 | Scaffold1075 | 207 | 1 | VIII |
LcERF60 | Lchi11824 | Scaffold1130 | 375 | 3 | VIII |
LcERF61 | Lchi13392 | Scaffold1763 | 207 | 1 | VIII |
LcERF62 | Unigene7795_All | Scaffold1763 | 205 | 0 | VIII |
LcERF63 | Lchi31572 | Scaffold1784 | 180 | 1 | VIII |
LcERF64 | Lchi08484 | Scaffold39 | 204 | 1 | IX |
LcERF65 | Lchi09908 | Scaffold79 | 316 | 1 | IX |
LcERF66 | Unigene24905_All | Scaffold79 | 170 | 0 | IX |
LcERF67 | Lchi01406 | Scaffold432 | 211 | 1 | IX |
LcERF68 | Unigene35921_All | Scaffold432 | 301 | 0 | IX |
LcERF69 | Lchi08172 | Scaffold580 | 324 | 0 | IX |
LcERF70 | Lchi07909 | Scaffold708 | 174 | 1 | IX |
LcERF71 | Lchi31530 | Scaffold803 | 105 | 2 | IX |
LcERF72 | CL9762.Contig1_All | Scaffold1024 | 307 | 0 | IX |
LcERF73 | Lchi05992 | Scaffold1024 | 250 | 1 | IX |
LcERF74 | Lchi05993 | Scaffold1024 | 350 | 2 | IX |
LcERF75 | Lchi26525 | Scaffold1934 | 272 | 1 | IX |
LcERF76 | Lchi26532 | Scaffold1934 | 361 | 3 | IX |
LcERF77 | Lchi28702 | Scaffold54 | 309 | 2 | X |
LcERF78 | Unigene10666_All | Scaffold100 | 235 | 1 | X |
LcERF79 | Lchi02215 | Scaffold682 | 229 | 1 | X |
LcERF80 | Lchi02216 | Scaffold682 | 196 | 1 | X |
LcERF81 | Lchi18461 | Scaffold943 | 403 | 1 | X |
LcERF82 | Lchi11856 | Scaffold1130 | 128 | 1 | X |
LcERF83 | Lchi01932 | Scaffold1191 | 292 | 1 | X |
LcERF84 | Lchi20453 | Scaffold1167 | 328 | 2 | VI-L |
LcERF85 | Lchi14855 | Scaffold41 | 394 | 6 | AP2 |
LcERF86 | Lchi23120 | Scaffold192 | 405 | 7 | AP2 |
LcERF87 | Lchi16948 | Scaffold480 | 550 | 9 | AP2 |
LcERF88 | Lchi08043 | Scaffold502 | 680 | 6 | AP2 |
LcERF89 | Lchi11241 | Scaffold503 | 375 | 8 | AP2 |
LcERF90 | Lchi28881 | Scaffold509 | 474 | 7 | AP2 |
LcERF91 | Lchi06162 | Scaffold527 | 524 | 7 | AP2 |
LcERF92 | Lchi03252 | Scaffold764 | 535 | 6 | AP2 |
LcERF93 | CL7987.Contig2_All | Scaffold805 | 572 | 12 | AP2 |
LcERF94 | Unigene5404_All | Scaffold2118 | 490 | 6 | AP2 |
LcERF95 | Lchi33401 | Scaffold2225 | 563 | 6 | AP2 |
LcERF96 | Lchi13837 | Scaffold2467 | 662 | 7 | AP2 |
LcERF97 | CL6967.Contig2_All | Scaffold2956 | 327 | 6 | AP2 |
LcERF98 | Unigene39546_All | Scaffold3476 | 468 | 7 | AP2 |
LcERF99 | Lchi08779 | Scaffold67 | 376 | 1 | RAV |
LcERF100 | Lchi02516 | Scaffold100 | 607 | 4 | RAV |
LcERF101 | Lchi02519 | Scaffold100 | 428 | 2 | RAV |
LcERF102 | Lchi15640 | Scaffold1242 | 354 | 2 | RAV |
LcERF103 | Lchi23744 | Scaffold1330 | 361 | 1 | RAV |
LcERF104 | Lchi32356 | Scaffold3563 | 235 | 5 | Soloist |