Skip to main content

Table 3 Resistance phenotype and genotype of matched pairs. Inh (isoniazid); Rif (rifampin); Emb (ethambutol); Str (streptomycin); Pza (pyrazinamide); Amk (amikacin)

From: The whole-genome sequencing in predicting Mycobacterium tuberculosis drug susceptibility and resistance in Papua, Indonesia

Sample Code

Xpert

Spoligo. Family

Inh

Rif

Emb

Str

Pza

Amk

Note

TB0065

R

EAI

R

R

R

R

  

MDR

TB0207

R

EAI

R

R

    

MDR

TB035

R

EAI

R

R

R

R

  

MDR

TB062

R

EAI

R

R

    

MDR

TB1007

R

EAI

R

R

    

MDR

TB1023

R

LAM

 

R

    

–

TB1186

R

Beijing RD105

R

R

    

MDR

TB240

R

LAM

R

     

–

TB284

R

Beijing RD105

R

R

R

 

R

 

MDR

TB345

R

Beijing RD105

R

R

    

MDR

TB487

R

Beijing RD105

R

R

    

MDR

TB524

R

Beijing RD105

 

R

    

–

TB530

R

LAM

R

R

R

   

MDR

TB618

R

LAM

   

R

 

R

MDR

TB674

R

EAI

R

R

    

MDR

TB690

R

LAM

R

R

    

MDR

TB751

R

LAM

   

R

  

–

TB752

R

LAM

R

R

R

   

MDR

TB153

R

EAI

R

R

    

MDR