Table 2 The average methylation level of methylation and some elements in different contexts
From: Methylome and transcriptome analyses of soybean response to bean pyralid larvae
Context | Sample | Average Level of Methylation (%) | CDS (%) | Down2k (%) | Up2k (%) | Exon (%) | mRNA (%) | Repeat (%) | CpG-island (%) |
|---|---|---|---|---|---|---|---|---|---|
C | HRK0 | 19.84 | 5.207 | 10.132 | 11.062 | 5.299 | 7.303 | 25.815 | 28.597 |
HRK48 | 21.30 | 5.441 | 11.182 | 12.218 | 5.607 | 7.965 | 27.090 | 28.950 | |
HSK0 | 20.96 | 5.563 | 11.249 | 12.378 | 5.677 | 8.019 | 26.182 | 28.698 | |
HSK48 | 18.37 | 5.156 | 8.924 | 9.688 | 5.100 | 7.008 | 25.396 | 26.625 | |
CG | HRK0 | 72.36 | 18.791 | 36.162 | 36.711 | 17.625 | 33.092 | 94.113 | 62.019 |
HRK48 | 73.33 | 18.121 | 37.534 | 38.155 | 17.301 | 33.034 | 94.326 | 61.385 | |
HSK0 | 74.71 | 19.587 | 39.442 | 40.439 | 18.570 | 34.679 | 94.593 | 62.283 | |
HSK48 | 68.27 | 19.732 | 31.538 | 31.641 | 17.581 | 32.772 | 93.837 | 57.562 | |
CHG | HRK0 | 46.14 | 7.715 | 25.111 | 28.541 | 9.231 | 12.804 | 70.380 | 48.399 |
HRK48 | 47.64 | 8.012 | 26.576 | 30.084 | 9.579 | 13.621 | 70.935 | 48.132 | |
HSK0 | 47.40 | 8.127 | 27.020 | 31.062 | 9.665 | 13.959 | 69.872 | 47.921 | |
HSK48 | 42.15 | 7.190 | 21.644 | 24.666 | 8.485 | 11.970 | 68.763 | 43.650 | |
CHH | HRK0 | 4.90 | 1.318 | 3.008 | 3.525 | 1.460 | 1.942 | 6.923 | 6.062 |
HRK48 | 5.81 | 1.524 | 3.587 | 4.201 | 1.696 | 2.353 | 8.063 | 6.968 | |
HSK0 | 5.08 | 1.364 | 3.154 | 3.686 | 1.511 | 2.064 | 6.939 | 6.056 | |
HSK48 | 5.29 | 1.427 | 2.961 | 3.406 | 1.567 | 2.097 | 7.897 | 6.582 |