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Table 3 Summary of CRISPR-generated strains verifying a subset of candidate intragenic and extragenic suppressing variants

From: Whole genome sequencing facilitates intragenic variant interpretation following modifier screening in C. elegans

Gene

Originating Strain

Injected Strain

Variant Effects

Hatching Rate (N)

Suppressor?

Phenotype

Strain Name

zyg-1

MTG57, MTG309, and MTG406

zyg-1(it25)

p.A385V

48.02% (5)

Yes

Viability

MTG470

zyg-1 24.7 °C

MTG57, MTG309, and MTG406

N2

p.A385V

94.78% (5)

N/A

Viability

MTG538

zyg-1 15 °C

MTG57, MTG309, and MTG406

N2

p.A385V

93.13% (5)

N/A

Viability

MTG538

zyg-1

MTG320

zyg-1(it25)

p.N420K and p.H409=

37.18% (8)

Yes

Viability

MTG498

zyg-1 (from 15 °C)

MTG329

zyg-1(it25)

p.K533E

0.19% (8)

No

Embryonic Lethality

MTG500

zyg-1 (from 20 °C)

MTG329

zyg-1(it25)

p.K533E

4.09% (5)

Yes

Viability

MTG500

zyg-8

MTG329

zyg-1(it25)

p.D31V

0% (4)

No

Embryonic Lethality

MTG531

aak-2

MTG329

zyg-1(it25)

p.G180R

0% (5)

No

Embryonic Lethality

MTG541

him-19

MTG329

zyg-1(it25)

p.P216S

1.09% (5)

No

Embryonic Lethality

MTG537

zyg-1

MTG398

zyg-1(it25)

c.-4 T/A

82.09% (7)

Yes

Viability

MTG542

zyg-1/+

MTG398

zyg-1(it25)

c.-4 T/A

19.48% (7)

Yes

Viability

MTG542/zyg-1(it25)