Table 2 Summary of transcriptome data generated in root, stem, leaf, flower
Sample name | Raw reads | Clean reads | Clean bases(G) | Error rate(%) | Q20(%) | Total mapped |
|---|---|---|---|---|---|---|
root1 | 61,923,840 | 61,278,296 | 9.19 | 0.02 | 98.22 | 49347822(80.53%) |
root2 | 59,085,774 | 56,835,612 | 8.53 | 0.03 | 97.71 | 46164456(81.22%) |
root3 | 50,949,232 | 50,224,936 | 7.53 | 0.02 | 98.20 | 39732948(79.11%) |
stem1 | 52,918,430 | 52,169,174 | 7.83 | 0.02 | 98.19 | 41240630(79.05%) |
stem2 | 49,945,800 | 49,481,408 | 7.42 | 0.02 | 98.36 | 40467226(81.78%) |
stem3 | 49,924,560 | 49,120,966 | 7.37 | 0.02 | 98.31 | 39130028(79.66%) |
leaf1 | 40,761,460 | 40,243,798 | 6.04 | 0.02 | 98.34 | 32651514(81.13%) |
leaf2 | 53,021,426 | 52,225,618 | 7.83 | 0.02 | 98.13 | 42585984(81.54%) |
leaf3 | 52,257,396 | 51,626,318 | 7.74 | 0.02 | 98.14 | 41497244(80.38%) |
flower1 | 77,506,190 | 76,382,598 | 11.46 | 0.02 | 98.15 | 53983590(70.68%) |
flower2 | 53,204,672 | 52,616,858 | 7.89 | 0.03 | 98.10 | 37283804(70.86%) |
flower3 | 56,907,780 | 56,118,732 | 8.42 | 0.02 | 98.09 | 39192864(69.84%) |
total | 658,406,560 | 648,324,314 | Â | Â | Â | Â |