Table 2 The mapping statistics for all the reads from all the MethylRAD libraries
Samples | Raw Reads | Enzyme Reads | Ratio | Unique Mapped Reads | Multiple Mapped Reads | Unique Mapping ratio | Multiple Mapping ratio |
|---|---|---|---|---|---|---|---|
BS366_col_1 | 138,774,718 | 49,583,815 | 35.73% | 4,321,361 | 44,579,071 | 8.72% | 89.91% |
BS366_col_2 | 138,774,718 | 45,195,153 | 32.57% | 3,824,533 | 40,805,978 | 8.46% | 90.29% |
BS366_con_1 | 138,774,718 | 49,388,164 | 35.59% | 4,244,368 | 44,521,958 | 8.59% | 90.15% |
BS366_con_2 | 138,774,718 | 48,491,659 | 34.94% | 4,227,335 | 43,659,713 | 8.72% | 90.04% |
J411_col_1 | 133,604,022 | 43,190,796 | 32.33% | 3,688,005 | 38,865,858 | 8.54% | 89.99% |
J411_col_2 | 133,604,022 | 44,081,539 | 32.99% | 3,729,612 | 39,787,159 | 8.46% | 90.26% |
J411_con_1 | 133,604,022 | 42,870,752 | 32.09% | 3,721,482 | 38,571,647 | 8.68% | 89.97% |
J411_con_2 | 133,604,022 | 41,554,362 | 31.10% | 3,570,751 | 37,443,799 | 8.59% | 90.11% |
All | 1,089,514,960 | 364,356,240 | 33.44% | 31,327,447 | 328,235,183 | 8.60% | 90.09% |