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Table 5 Differentially expressed genes in leaf tissue of Mentzelia filifolia from the drought-shocked treatment compared to the control. Measures of log-fold change (logFC) and false discovery rate (FDR) were used to determine significance and direction of regulation. LogFC values are in comparison to the control levels of expression from the same tissue/species

From: Inferring the genetic responses to acute drought stress across an ecological gradient

Transcript cluster ID Annotation logFC FDR
Cluster-58816.0 PREDICTED: uncharacterized protein LOC104428360 -8.37 0.0028
Cluster-48670.0 Protein TAR1 -7.81 0.0013
Cluster-58105.0 Hypothetical protein CDL37_04775, partial -7.72 0.0011
Cluster-39297.0 Hypothetical protein CDL37_04775, partial -7.60 0.0011
Cluster-50655.1 Hypothetical protein T12_6945, partial -7.59 0.0011
Cluster-41545.0 PREDICTED: uncharacterized protein LOC109358019 -7.52 0.0011
Cluster-60839.0 Protein TAR1 -7.49 0.0011
Cluster-34501.0 Hypothetical protein BC332_34878 -7.49 0.0011
Cluster-62161.0 Predicted protein -7.44 0.0015
Cluster-34654.0 Protein TAR1 -7.40 0.0011
Cluster-7656.2 Transmembrane protein, putative -7.38 0.0011
Cluster-41578.0 Hypothetical protein BC332_34878 -7.36 0.0011
Cluster-41545.1 PREDICTED: uncharacterized protein LOC106795708 -7.35 0.0011
Cluster-50091.0 Protein TAR1 -7.30 0.0011
Cluster-49212.0 ATP synthase subunit beta -7.29 0.0011
Cluster-31834.0 Protein TAR1 -7.28 0.0024
Cluster-49252.0 Hypothetical protein GLYMA_13G0132002, partial -7.23 0.0054
Cluster-34739.0 Predicted protein -7.22 0.0013
Cluster-36863.0 Regulator of rDNA transcription protein 15 -7.20 0.0011
Cluster-47860.0 Protein TAR1 -7.19 0.0011
Cluster-40814.0 Protein TAR1 -7.19 0.0018
Cluster-52445.0 Regulator of rDNA transcription protein 15 -7.19 0.0011
Cluster-35862.0 Uncharacterized protein LOC110824766, partial -7.18 0.0018
Cluster-51124.0 Alpha-L1 nicotinic acetyl choline receptor -7.14 0.0011
Cluster-59385.0 Hypothetical protein CQW23_33511 -7.14 0.0011
Cluster-37035.0 Cytochrome P450 monooxygenase -7.12 0.0015
Cluster-57663.0 Predicted protein -7.11 0.0011
Cluster-51272.0 Regulator of rDNA transcription protein 15 -7.10 0.0011
Cluster-60616.1 Hypothetical protein CQW23_33755 -7.08 0.0018
Cluster-59060.0 Predicted protein -7.02 0.0011
Cluster-52045.0 Cytochrome P450 like_TBP -7.01 0.0011
Cluster-23459.2 Regulator of rDNA transcription protein 15 -7.00 0.0011
Cluster-42269.0 Protein TAR1 -6.97 0.0011
Cluster-62261.0 Predicted protein -6.93 0.0011
Cluster-36057.0 CASP-like protein 4A3 -6.91 0.0011
Cluster-38658.0 Protein TAR1 -6.87 0.0011
Cluster-59522.0 Transmembrane protein, putative -6.84 0.0011
Cluster-63249.0 Aquaporin TIP1-1 -6.52 0.0011
Cluster-55831.0 Protein TAR1-like -6.52 0.0016
Cluster-41007.0 Regulator of rDNA transcription protein 15 -6.47 0.0021
Cluster-51769.0 Regulator of rDNA transcription protein 15 -6.37 0.0016
Cluster-56791.0 Uncharacterized protein LOC109940280 -6.37 0.0032
Cluster-50338.0 Hypothetical protein BUMB_02141 -6.31 0.0023
Cluster-31006.0 Regulator of rDNA transcription protein 15 -6.24 0.0012
Cluster-59353.0 Regulator of rDNA transcription protein 15 -6.06 0.0018
Cluster-50764.0 Hypothetical protein T459_27227 -6.04 0.0051
Cluster-51946.0 Regulator of rDNA transcription protein 15 -6.04 0.0034
Cluster-60097.0 Regulator of rDNA transcription protein 15 -5.89 0.0029
Cluster-42721.0 Regulator of rDNA transcription protein 15 -5.87 0.0028
Cluster-56732.0 No homology -5.72 0.0067
Cluster-35355.0 Cytochrome P450-like TBP protein -5.59 0.0137
Cluster-46825.0 Regulator of rDNA transcription protein 15 -5.57 0.0032
Cluster-53270.0 Hypothetical protein CQW23_33511 -5.40 0.0052
Cluster-44046.0 Probable inactive patatin-like protein 9 -5.06 0.0054
Cluster-32710.0 PREDICTED: uncharacterized protein LOC104811909 -5.04 0.0149
Cluster-34807.0 Zinc finger protein 1 -4.99 0.0189
Cluster-59670.0 Senescence-associated protein, putative -4.97 0.0193
Cluster-41530.0 Hypothetical protein SERLA73DRAFT_67532, partial -4.93 0.0011
Cluster-51948.0 Hypothetical protein GLYMA_13G013900 -4.91 0.0016
Cluster-61489.1 Predicted protein -4.80 0.0016
Cluster-53940.0 Wound-responsive family protein -4.79 0.0331
Cluster-57103.0 Delta(24)-sterol reductase -4.73 0.0185
Cluster-31264.0 Hypothetical protein OXYTRI_14248 (macronuclear) -4.70 0.0016
Cluster-61489.2 Hypothetical protein GLYMA_13G015500, partial -4.65 0.0018
Cluster-60530.0 Probable inactive receptor kinase At5g67200 -4.55 0.0365
Cluster-38796.0 Uncharacterized protein LOC110277292 -4.54 0.0025
Cluster-62327.0 Uncharacterised protein -4.47 0.0388
Cluster-61719.0 Organ-specific protein S2-like -4.43 0.0445
Cluster-53551.0 Tar1p like protein -4.38 0.0022
Cluster-55762.0 Tar1p, partial -4.35 0.0140
Cluster-42910.0 PREDICTED: uncharacterized protein LOC105736981 -4.33 0.0031
Cluster-62007.0 Hypothetical protein GLYMA_U007300 -4.27 0.0113
Cluster-35209.0 No homology -4.23 0.0194
Cluster-42867.0 Acidic endochitinase-like -4.22 0.0462
Cluster-50876.0 Indole-3-acetic acid-induced protein ARG2-like -4.16 0.0392
Cluster-48507.0 Regulator of rDNA transcription protein 15 -4.15 0.0392
Cluster-57366.0 No homology -4.10 0.0053
Cluster-52390.3 Metallocarboxypeptidase inhibitor -4.07 0.0123
Cluster-63044.0 Hypothetical protein GOBAR_DD19277 -4.05 0.0251
Cluster-54706.0 S-adenosylmethionine decarboxylase proenzyme-like -3.99 0.0270
Cluster-36407.0 Hypothetical protein GLYMA_U007300 -3.96 0.0093
Cluster-59427.0 Hypothetical protein SERLA73DRAFT_67532, partial -3.91 0.0073
Cluster-41436.2 Chromosome 3B, genomic scaffold -3.89 0.0117
Cluster-61466.0 rRNA intron-encoded homing endonuclease, putative -3.86 0.0251
Cluster-61875.0 rRNA intron-encoded homing endonuclease -3.86 0.0194
Cluster-51170.0 UNKNOWN -3.59 0.0295
Cluster-34949.0 Indole-3-acetate O-methyltransferase 1 -3.56 0.0270
Cluster-59063.0 PREDICTED: uncharacterized protein LOC109176672 -3.54 0.0178
Cluster-42283.0 Senescence-associated protein -3.48 0.0416
Cluster-34872.0 Cold-regulated protein -3.37 0.0270
Cluster-43131.0 Tonoplast dicarboxylate transporter -3.27 0.0445
Cluster-34593.0 No homology -3.21 0.0331
Cluster-54555.0 No homology -2.94 0.0404
Cluster-47071.0 Hypothetical protein ABT39_MTgene6262 2.98 0.0451
Cluster-61726.0 No homology 3.25 0.0138
Cluster-40722.0 No homology 3.78 0.0335
Cluster-62217.0 Protein RADIALIS-like 5 3.98 0.0375
Cluster-52889.0 Nitrate reductase 2 4.13 0.0331
Cluster-33868.0 Crocetin glucosyltransferase, chloroplastic-like 4.32 0.0171
Cluster-63829.0 No homology 6.40 0.0024
Cluster-48746.0 No homology 7.00 0.0025
Cluster-33695.0 Probable xyloglucan endotransglucosylase/Hydrolase protein 23 -4.54 0.0080
Cluster-58851.0 Pentatricopeptide repeat-containing protein At1g07590, Mitochondrial 3.64 0.0134