Table 1 Annotation of SNPs located on genome

–

INTERGENIC

1,360,676

1,416,909

1,375,094

–

INTRAGENIC

65,586

67,712

65,674

–

INTRON

1,097,057

1,142,780

1,107,386

–

UPSTREAM

234,197

243,993

237,352

–

DOWNSTREAM

234,933

244,234

236,945

–

SPLICE_SITE_ACCEPTOR

281

302

282

–

SPLICE_SITE_DONOR

385

384

374

–

SPLICE_SITE_REGION

10,238

10,490

10,382

CDS

START_LOST

131

140

131

CDS

SYNONYMOUS_CODING

85,675

89,775

86,776

CDS

NON_SYNONYMOUS_CODING

48,144

50,097

48,283

CDS

SYNONYMOUS_STOP

55

53

49

CDS

STOP_GAINED

562

607

566

CDS

STOP_LOST

90

97

95