Table 1 The number of F-box protein-coding genes identified in six species of nematodes
Species | Hmmer | psscan | Hmmer & psscan | psiblast | F-box genes | Genome genes | Percent |
|---|---|---|---|---|---|---|---|
C. brenneri | 559 | 471 | 437 | 1 | 594 | 30,667 | 1.93% |
C. briggsae | 181 | 150 | 139 | 0 | 192 | 21,936 | 0.88% |
C. elegans | 356 | 302 | 281 | 0 | 377 | 20,532 | 1.84% |
C. japonica | 35 | 23 | 19 | 0 | 39 | 29,964 | 0.13% |
C. remanei | 1377 | 1252 | 1203 | 1 | 1426 | 31,444 | 4.54% |
P. pacificus | 95 | 79 | 77 | 0 | 97 | 29,644 | 0.33% |