Table 1 List of genes annotated in the chloroplast genomes of Staphania tetrandra voucher ZJ

1

Photosystem I

psaJ, psaC, psaB, psaA, psaI

5

2

Photosystem II

psbE, psbB, psbT, psbN, psbH, psbJ, psbL, psbF, psbA, psbK, psbI, psbM, psbD, psbZ

14

3

Cytochrome b/f complex

petL, petG, petB*, petD*, petA, petN

6

4

ATP synthase

atpE, atpB, atpA, atpF*, atpH, atpI

6

5

NADH dehydrogense

ndhB*(× 2), ndhF, ndhD, ndhE, ndhJ, ndhK, ndhC, ndhA*, ndhG, ndhI, ndhH

12

6

RubisCO large subunit

rbcL

1

7

RNA polymerase

rpoA, rpoC2, rpoC1*, rpoB,

4

8

Ribosomal proteins (SSU)

rps11, rps8, rps3, rps19, rps7, rps14, rps4, rps18, rps12**(×2), rps16*, rps2, rps15

13

9

Ribosomal proteins (LSU)

rpl33, rpl20, rpl36, rpl14, rpl16*, rpl22, rpl2*(×2), rpl23(× 2), rpl32, rpl33, rpl20

13

10

Other genes

clpP**, infA, ccsA, accD, cemA, matK

6

11

Proteins of unknown function

ycf2(×2), ycf3**, ycf4, ycf1, ycf15(× 2)

7

12

Transfer RNAs

37 tRNAs (8 contain an intron,7 in the IRs)

37

13

Ribosomal RNAs

rrn4.5(×2), rrn5(× 2), rrn16(× 2), rrn23(× 2)

8

14

pseudo genes

ycf1, rps19

2