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Table 5 The value of Ka/Ks in 25 protein coding genes with RNA editing sites in S. tetrandra voucher ZJ

From: Complete chloroplast genome of Stephania tetrandra (Menispermaceae) from Zhejiang Province: insights into molecular structures, comparative genome analysis, mutational hotspots and phylogenetic relationships

Gene

Number of RNA editing sites

Non-synonymous substitutions (Ka)

Synonymous substitutions (Ks)

Ka/Ks

ndhB

13

0.0035

0.0107

0.3271

ndhD

9

0.0106

0.0947

0.1119

rpoB

8

0.0045

0.0613

0.2887

rpoC2

7

0.0177

0.0615

0.0732

ndhF

7

0.0202

0.0181

0.1869

ndhA

6

0.0074

0.0927

0.0798

matK

4

0.0373

0.0948

0.3936

atpA

4

0.0061

0.0617

0.0989

accD

4

00159

0.0444

0.3581

atpI

4

0.0054

0.0385

0.1403

rpoC1

3

0.0071

0.0595

0.1193

ndhG

3

0.0101

0.0734

0.1376

ccsA

3

0.0239

0.1146

0.2086

rpoA

2

0.0207

0.0841

0.2461

rps2

2

0.0037

0.0824

0.0449

clpP

2

0.0022

0.0554

0.0397

rps14

2

0.0131

0.0453

0.2892

rps16

2

0.0047

0.0295

0.1593

petB

2

0.08

0

0

atpB

1

0.0036

0.0643

0.0559

atpF

1

0.2122

0.1658

1.2799

rpl2

1

0.0091

0.0108

0.8426

rpl20

1

0.0116

0.0486

0.2387

ycf3

1

0.0078

0.0423

0.1844

psbF

1

0

0

0