Table 8 Multiple analysis of the mutational hotspots in four Stephania plants
Mutational hotspots | Species | Length | Number of SNP sites | Total length of Gaps | Ka/ks |
|---|---|---|---|---|---|
trnH-psbA | S. tetrandra voucher ZJ | 543 bp | / | / | 1.0892 |
S. tetrandra voucher JX | 597 bp | 62 | 30 | 0.9363 | |
S. japonica | 594 bp | 83 | 29 | 0.7585 | |
S. kwangsiensis | 556 bp | 121 | 31 | 0.8556 | |
rps16 | S. tetrandra voucher ZJ | 1146 bp | / | / | 0.5510 |
S. tetrandra voucher JX | 1206 bp | 97 | 26 | 0.5689 | |
S. japonica | 1124 bp | 83 | 29 | 0.7639 | |
S. kwangsiensis | 827 bp | 136 | 83 | 0.7030 | |
trnD-trnY | S. tetrandra voucher ZJ | 404 bp | / | / | 0.7224 |
S. tetrandra voucher JX | 475 bp | 65 | 14 | 0.8217 | |
S. japonica | 481 bp | 70 | 8 | 1.4076 | |
S. kwangsiensis | 481 bp | 57 | 9 | 1.1759 | |
trnP | S. tetrandra voucher ZJ | 662 bp | / | / | 1.1528 |
S. tetrandra voucher JX | 687 bp | 77 | 28 | 0.9143 | |
S. japonica | 673 bp | 91 | 18 | 1.1237 | |
S. kwangsiensis | 616 bp | 106 | 32 | 1.5410 | |
ndhA | S. tetrandra voucher ZJ | 531 bp | / | / | 1.3464 |
S. tetrandra voucher JX | 492 bp | 97 | 8 | 0.7692 | |
S. japonica | 507 bp | 84 | 7 | 1.0783 | |
S. kwangsiensis | 492 bp | 91 | 21 | 0.9638 |