Table 1 Summary of reads for enrichment-based sequencing and whole genome sequencing
From: InMut-finder: a software tool for insertion identification in mutagenesis using Nanopore long reads
Enrichment-based in soybean | Without enrichment in M. truncatula | |
|---|---|---|
Raw reads | 3.9 million | 2.4 million |
Average read length (bp) | 1004 | 7307 |
N50 (bp) | 1112 | 2254 |
Tag-inserted reads | 49,271 | 2891 |
Average read length (bp) | 1307 | 9068 |
N50 (bp) | 1423 | 837 |
Flanking sequences | 77,527 | 3695 |
Average length (bp) | 401 | 3781 |
N50 (bp) | 654 | 98 |