Traitsa | Chrb | SNP name | Position (bp) | Major/minor allele | MAFc | SNP effect | SEd | P-value |
---|---|---|---|---|---|---|---|---|
col_IgG | 2 | BovineHD0200028482 | 98,947,581 | G/A | 0.36 | −12.63 | 3.10 | 4.70E-05 |
col_IgG | 4 | ARS-BFGL-NGS-67542 | 190,619 | A/G | 0.38 | 13.20 | 2.98 | 9.66E-06 |
col_IgG | 4 | ARS-BFGL-NGS-114472 | 253,919 | C/A | 0.38 | 13.18 | 2.98 | 9.66E-06 |
col_IgG | 4 | ARS-BFGL-NGS-102812 | 360,794 | G/A | 0.38 | 13.18 | 2.98 | 9.66E-06 |
col_IgG | 6 | BovineHD0600021193 | 76,307,745 | A/G | 0.29 | 14.03 | 3.34 | 2.66E-05 |
col_IgG | 6 | BovineHD0600021227 | 76,365,244 | G/A | 0.29 | 14.08 | 3.34 | 2.45E-05 |
col_IgG | 6 | BovineHD0600021233 | 76,396,527 | A/G | 0.29 | 14.08 | 3.34 | 2.45E-05 |
col_IgG | 6 | Hapmap50522-BTA-98140 | 76,718,463 | A/G | 0.40 | 12.50 | 3.11 | 5.94E-05 |
col_IgG | 6 | BovineHD0600021300 | 76,762,984 | A/C | 0.41 | 12.70 | 3.07 | 3.57E-05 |
col_IgG | 18 | ARS-BFGL-NGS-88483 | 40,843,328 | A/G | 0.49 | −13.35 | 2.94 | 5.47E-06 |
col_IgG | 22 | BovineHD2200017739 | 60,902,629 | A/C | 0.24 | 15.87 | 3.41 | 3.18E-06 |
col_IgG1 | 11 | ARS-BFGL-NGS-27262 | 32,766,825 | A/T | 0.35 | −0.31 | 0.07 | 2.94E-05 |
col_IgG1 | 11 | BovineHD1100011957 | 40,807,680 | A/G | 0.35 | −0.30 | 0.07 | 6.15E-05 |
col_IgG1 | 13 | ARS-BFGL-NGS-11585 | 17,407,043 | C/A | 0.34 | −0.39 | 0.08 | 5.10E-07 |
col_IgG2 | 20 | BovineHD2000021006 | 71,896,856 | G/A | 0.27 | 0.24 | 0.04 | 7.30E-10 |
col_IgG2 | 21 | BovineHD2100019814 | 67,542,721 | A/C | 0.36 | 0.16 | 0.04 | 1.09E-05 |
col_IgG2 | 21 | BovineHD4100015366 | 67,786,313 | A/G | 0.42 | 0.14 | 0.04 | 4.99E-05 |
col_IgG2 | 21 | ARS-BFGL-NGS-86477 | 68,399,787 | A/C | 0.48 | −0.14 | 0.04 | 4.11E-05 |
col_IgG2 | 21 | BovineHD2100020225 | 69,289,258 | A/G | 0.33 | 0.15 | 0.04 | 1.64E-05 |
col_IgG2 | 21 | BovineHD2100020241 | 69,357,379 | A/C | 0.42 | 0.16 | 0.04 | 1.18E-05 |
col_IgG2 | 21 | ARS-BFGL-NGS-115062 | 69,395,154 | G/A | 0.44 | 0.15 | 0.04 | 1.73E-05 |
col_IgG2 | 21 | BovineHD2100020341 | 69,673,486 | A/G | 0.36 | 0.17 | 0.03 | 1.56E-06 |
col_IgG2 | 21 | BovineHD2100020413 | 69,920,970 | G/A | 0.38 | 0.14 | 0.03 | 5.64E-05 |
col_IgG2 | 21 | BovineHD2100020670 | 70,592,463 | A/C | 0.41 | 0.14 | 0.03 | 5.65E-05 |
col_IgG2 | 21 | ARS-BFGL-NGS-2644 | 70,608,408 | A/G | 0.35 | 0.18 | 0.04 | 1.36E-06 |
col_IgG2 | 21 | BovineHD2100020676 | 70,621,565 | G/A | 0.35 | 0.18 | 0.04 | 8.02E-07 |
col_IgG2 | 21 | BovineHD2100020685 | 70,655,075 | A/G | 0.32 | 0.20 | 0.04 | 1.56E-07 |
col_IgG2 | 21 | BovineHD2100020689 | 70,672,433 | A/G | 0.38 | 0.16 | 0.04 | 6.43E-06 |
col_IgG2 | 21 | BovineHD2100020696 | 70,687,439 | G/A | 0.37 | 0.15 | 0.03 | 1.43E-05 |
col_IgG2 | 21 | ARS-BFGL-NGS-73522 | 70,702,245 | G/A | 0.35 | 0.17 | 0.04 | 3.47E-06 |
col_IgG2 | 21 | BovineHD2100020833 | 71,318,798 | A/G | 0.29 | 0.17 | 0.04 | 4.71E-06 |
col_IgG2 | 21 | BovineHD2100020853 | 71,389,313 | G/A | 0.25 | −0.17 | 0.04 | 4.96E-05 |
col_IgA | 1 | BovineHD0100012272 | 43,118,172 | C/A | 0.43 | 0.16 | 0.03 | 3.73E-06 |
col_IgA | 1 | BovineHD0100012276 | 43,138,880 | C/A | 0.43 | 0.16 | 0.03 | 2.16E-06 |
col_IgA | 5 | BovineHD0500021305 | 74,998,613 | G/A | 0.34 | −0.15 | 0.03 | 6.46E-06 |
col_IgM | 1 | BovineHD0100012272 | 43,118,172 | C/A | 0.43 | 0.10 | 0.02 | 1.53E-05 |
col_IgM | 1 | BovineHD0100012276 | 43,138,880 | C/A | 0.43 | 0.10 | 0.02 | 1.02E-05 |
col_IgM | 10 | BovineHD1000019825 | 69,080,826 | C/A | 0.15 | −0.13 | 0.03 | 1.23E-05 |
col_IgM | 10 | BovineHD1000019983 | 69,718,494 | A/C | 0.31 | −0.10 | 0.02 | 1.78E-05 |
col_IgM | 10 | BovineHD1000024944 | 87,623,949 | A/G | 0.44 | 0.09 | 0.02 | 4.44E-05 |
col_IgM | 10 | BovineHD1000024954 | 87,671,849 | A/G | 0.44 | 0.09 | 0.02 | 4.44E-05 |
col_IgM | 15 | BovineHD1500000388 | 1,498,954 | G/A | 0.49 | 0.09 | 0.02 | 4.89E-05 |
col_IgM | 15 | BovineHD1500000626 | 2,664,438 | A/G | 0.48 | −0.10 | 0.02 | 8.90E-06 |
col_IgM | 15 | BovineHD1500000698 | 3,061,918 | A/G | 0.35 | −0.10 | 0.02 | 1.22E-05 |
col_IgM | 15 | BTB-01900838 | 4,285,360 | A/G | 0.32 | 0.10 | 0.02 | 3.98E-05 |
col_IgM | 15 | BovineHD1500001009 | 4,395,956 | G/A | 0.31 | 0.09 | 0.02 | 5.07E-05 |
col_IgM | 17 | ARS-BFGL-NGS-117653 | 73,315,120 | A/C | 0.40 | −0.09 | 0.02 | 3.30E-05 |