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Fig. 2 | BMC Genomics

Fig. 2

From: Extensive evaluation of ATAC-seq protocols for native or formaldehyde-fixed nuclei

Fig. 2

QC measures calculated for all conditions. a-e Individual metrics calculated for all 96 samples. These include a TSS enrichment, b FRiP calculated using ENCODE DNase I hypersensitive sites as the reference peaks, c Sub-nucleosomal score, d %mito, and e complexity. f-i Heatmaps of correlations among all 5 QC measures for f native samples at 37 °C, g native samples at 55 °C, h fixed samples at 37 °C, and i fixed samples at 55 °C

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