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Table 4a Ratio estimation of artificial mixtures used as template DNA for long range PCR

From: Long range PCR-based deep sequencing for haplotype determination in mixed HCMV infections

Artificial Mixture

HCMV-DNA

Aspired input ratio

Measured copies/ml1

Measured ratio1

Copy input for PCR

Measured ratio2

1

Merlin

50

3.90E+ 06

57

3.90E+ 04

44

 

TB40-BAC4-luc

50

2.90E+ 06

43

2.90E+ 04

56

2

Merlin

95

8.60E+ 06

94

8.60E+ 04

94

 

TB40-BAC4-luc

5

4.70E+ 05

6

4.70E+ 03

6

3

Merlin

5

4.70E+ 05

11

4.70E+ 03

3

 

TB40-BAC4-luc

95

3.90E+ 06

89

3.90E+ 04

97

4

Merlin

99

1.20E+ 07

99

1.20E+ 05

98

 

TB40-BAC4-luc

1

1.30E+ 05

1

1.30E+ 03

2

5

Merlin

1

1.90E+ 05

5

1.90E+ 03

1

 

TB40-BAC4-luc

99

3.90E+ 06

95

3.90E+ 04

99

  1. 1) confirmed by HCMV-specific qPCR against gH; 2) measured ratios are means of reads mapping to genotypic regions within gN, gO, and gH; sequencing was done in duplicates