Transcriptome and methylome changes in two contrasting mungbean genotypes in response to drought stress

BMC Genomics

Table 1 Statistics of RNA-seq for control and drought-treated samples of wild mungbean 61 and mungbean cultivar 70

Samples	Raw reads (M)	Raw bases (G)	Clean reads (M)	Clean bases (G)	Valid bases (%)	Q30	GC
Samples	Raw reads (M)	Raw bases (G)	Clean reads (M)	Clean bases (G)	Valid bases (%)	(%)	(%)
C61–1	43.18	6.48	42.89	6.41	98.9	95.12	45.29
C61–2	43.90	6.58	43.58	6.51	98.84	95.22	45.48
C70–1	47.10	7.07	46.39	6.88	97.36	94.49	44.64
C70–2	40.53	6.08	39.91	5.92	97.32	94.43	44.6
D61–1	41.86	6.28	41.56	6.21	98.83	95.22	45.56
D61–2	48.09	7.21	47.87	7.16	99.24	95.27	44.93
D70–1	43.62	6.54	42.97	6.36	97.16	94.57	44.68
D70–2	46.42	6.96	45.76	6.76	97.10	94.44	42.49

C61–1, C61–2 and C70–1, C70–2 represent two replicates of well-watered wild mungbean 61 and mungbean cultivar 70, respectively; D61–1, D61–2 and D70–1, D70–2 represent two replicates of drought-stressed wild mungbean 61 and mungbean cultivar 70, respectively. Raw reads/bases: reads/bases generated by Illumina HiSeq X Ten platform. Clean reads/bases: reads/bases after filtering poor quality score reads and trimming adaptors using Trimmomatic v0.32 program. Valid bases (%) = (Clean bases number / Raw bases number) * 100%. Q30: Phred quality score of 30; GC: GC content

ISSN: 1471-2164