Transcriptome and methylome changes in two contrasting mungbean genotypes in response to drought stress

BMC Genomics

Table 2 Statistics of WGBS for control and drought stress treated samples of wild mungbean 61 and mungbean cultivar 70

Samples	Raw reads (M)	Raw bases (G)	Clean reads (M)	Clean bases (G)	Valid bases (%)	Mapped reads (M)	Mapping rate (%)	BS conversion rate (%)
C61–1	78.39	23.52	76.55	20.92	88.95	43.76	57.16	99.23
C61–2	77.49	23.25	75.55	20.61	88.65	43.24	57.23	99.27
D61–1	77.89	23.37	76.07	20.78	88.92	43.45	57.12	99.14
D61–2	79.49	23.85	77.58	21.19	88.85	44.10	56.84	99.24
C70–1	82.71	24.81	80.64	21.94	88.43	63.43	78.66	99.21
C70–2	71.94	21.58	70.12	19.14	88.69	55.45	79.08	99.25
D70–1	72.69	21.81	70.85	19.34	88.67	55.94	78.95	99.32
D70–2	73.02	21.91	71.37	19.50	89.00	56.23	78.79	99.34

C61–1, C61–2 and C70–1, C70–2 represent two replicates of well-watered wild mungbean 61 and mungbean cultivar 70, respectively; D61–1, D61–2 and D70–1, D70–2 represent two replicates of drought-stressed wild mungbean 61 and mungbean cultivar 70, respectively. Raw reads/bases: reads/bases generated by Illumina Novaseq platform. Clean reads/bases: reads/bases after filtering poor quality score reads and trimming using fastp software. Valid bases (%) = (clean reads number / raw reads number) * 100%. Mapping rate = (mapped reads / clean reads) * 100%. BS conversion rate (%) = (converted cytosines / total cytosines in unmethylated lambda DNA reference) * 100%

ISSN: 1471-2164