Table 2 Total SNPs identified in FAD2 family genes using the 32mSNPs
Total | FAD2-1A | FAD2-1B | FAD2-2A | FAD2-2B | FAD2-2C | FAD2-2D | FAD2-2E | |
|---|---|---|---|---|---|---|---|---|
Total Genic SNPs | 340 | 16 | 60 | 22 | 23 | 144 | 67 | 8 |
CDSa | 91 | 7 | 19 | 19 | 9 | 20 | 8 | 9 |
Non-Synonymous | 53 | 6 | 8 | 13 | 3 | 11 | 5 | 7 |
Synonymous | 38 | 1 | 11 | 6 | 6 | 9 | 3 | 2 |
Splice Site | 2 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
Premature Termination Codon | 2 | 0 | 0 | 1 | 0 | 1 | 0 | 0 |
Five Prime UTRb | 55 | 5 | 25 | 0 | 10 | 10 | 5 | 0 |
Three Prime UTR | 11 | 1 | 3 | 0 | 3 | 4 | 0 | 0 |
Intron | 191 | 3 | 13 | 4 | 1 | 116 | 14 | 0 |