Table 5 Comparisons between putative gamma-irradiated and natural SNPs

Total

2,434

2,736

16,096,275

Transition

1,579

(64.873)

1,707

(62.390)

11,463,128

(71.216)

Transversion

855

(35.127)

1,029

(37.610)

4,623,419

(28.724)

Ts/Tv ratio

1.847

1.659

2.479

Exon

10

(0.411)

12

(0.439)

106,183

(0.660)

Synonymous

3

(0.123)

2

(0.073)

45,138

(0.280)

Non-synonymous

7

(0.288)

10

(0.365)

61,045

(0.379)

Intron

16

(0.657)

20

(0.731)

247,662

(1.539)

UTRs

4

(0.164)

2

(0.073)

50,368

(0.313)

Intergenic

2,411

(99.055)

2,704

(98.830)

15,796,460

(98.137)

High-impact variants^a

Total

0

(0.000)

1

(0.037)

1,648

(0.010)

Non-sense mutations

0

(0.000)

1

(0.037)

830

(0.005)

Start codon lost

0

(0.000)

0

(0.000)

92

(0.001)

Stop codon lost

0

(0.000)

0

(0.000)

276

(0.002)

Splice sites

0

(0.000)

0

(0.000)

454

(0.003)