The EurOPDX Data Portal: an open platform for patient-derived cancer xenograft data sharing and visualization

BMC Genomics

Table 3 Links to publicly available datasets

Institute (acronym)	Cancer Type (data set acronym)	Relevant PDX Models	Link to data
Curie Institute - Preclinical Investigation Laboratory, France	Ovarian Cancer (Curie-OV)	OV10, OV14	http://identifiers.org/doi:10.17632/fstsb2xfsf.1
		OV25	http://identifiers.org/doi:10.17632/fstsb2xfsf.1; http://www.ebi.ac.uk/biostudies/studies/S-EPMC5725143?xr=true
		OV16, OV54	http://www.ebi.ac.uk/biostudies/studies/S-EPMC5725143?xr=true
Luxembourg Institute of Health - NORLUX laboratory	Glioma (LIH)	T16, T192, T233, T251, T341, T347, T470, T476, T591, T384	http://identifiers.org/ebi/bioproject:PRJNA627814
TRACE - Patient Derived Tumor Xenograft Platform, KU Leuven and UZ Leuven, Belgium	Breast Cancer, Cutaneous Melanoma, Uterine Cancer (TRACE)	MEL0029LY	https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE70180
	Breast Cancer, Cutaneous Melanoma, Uterine Cancer (TRACE)	MEL0002LY	https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE116237
Vall d’Hebron Institute of Oncology, Spain	Colorectal Cancer (VHIO-CRC)	M001, M043	https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE96528
University Medical Center Groningen, Netherlands	Ovarian Cancer (UMCG)	UMCGOVPDX81, UMCGOVPDX68a, UMCGOVPDX37, UMCGOVPDX56, UMCGOVPDX84, UMCGOVPDX70, UMCGOVPDX79, UMCGOVPDX36	https://www.ebi.ac.uk/biostudies/studies/S-EPMC4594124?xr=true

ISSN: 1471-2164