Table 2 Numbers of differentially expressed genes identified in the different pairwise group comparisons. Numbers in brackets are only based on FDR-adjusted p-values, the other numbers were obtained when using additionally a threshold for the log2 fold change. The last columns shows the numbers of significantly enriched GO-terms. Detailed results for each comparison for the union of 7387 genes and 111 GO terms are provided as Supplementary Tables T1 and T2
Comparison | # Differentially expressed genes | # Up-regulated | # Down-regulated | # Significantly enriched GO-terms |
|---|---|---|---|---|
DF versus Normal | 4 (582) | 4 (421) | 0 (161) | 16 |
DHF versus Normal | 10 (1378) | 9 (957) | 1 (421) | 4 |
DSS versus Normal | 23 (1921) | 22 (1627) | 1 (294) | 24 |
Convalescent versus Normal | 0 (0) | 0 (0) | 0 (0) | 0 |
DHF versus DF | 0 (23) | 0 (0) | 0 (23) | 0 |
DSS versus DF | 0 (1341) | 0 (1180) | 0 (161) | 0 |
Convalescent versus DF | 36 (2790) | 35 (2043) | 1 (747) | 97 |
DSS versus DHF | 0 (1072) | 0 (961) | 0 (111) | 0 |
Convalescent versus DHF | 51 (3489) | 48 (2224) | 3 (1265) | 0 |
DSS versus Convalescent | 67 (4972) | 64 (4054) | 3 (918) | 35 |
Union | 72 (7387) | 68 (5794) | 4 (1787) | 111 |