Table 4 Variable site analyses in the chloroplast genomes of Ilex species
Region | Total number of sites | Polymorphic sites | Singleton variable sites | Parsimony informative sites | Nucleotide diversity |
|---|---|---|---|---|---|
LSC | 88,362 | 2182 | 1200 | 982 | 0.00384 |
IRa | 26,162 | 94 | 57 | 37 | 0.00055 |
SSC | 18,460 | 582 | 319 | 263 | 0.00498 |
IRb | 26,167 | 89 | 54 | 35 | 0.00050 |
Plastome | 159,151 | 2947 | 1630 | 1317 | 0.00286 |