Table 1 Whole genome sequence data and chloroplast genomes comparison of C. gigantea, C. bicolor and X. sagittifolium
species | Colocasia gigantea | Caladium bicolor | Xanthosoma sagittifolium |
|---|---|---|---|
Locations | Jiangxi | Hainan | Guangxi |
Whole genome reads | 19,362,830 | 17,475,516 | 27,498,048 |
Chloroplast reads | 1,227,229 | 792,949 | 1,109,410 |
Mean coverage | 1159 | 629 | 972 |
Size (bp) | 165,906 | 163,149 | 165,169 |
LSC (bp) | 91,710 | 89,383 | 91,121 |
SSC (bp) | 22,994 | 21,210 | 21,078 |
IR (bp) | 25,601 | 26,278 | 26,485 |
Number of total genes | 131 | 131 | 131 |
Number of CDS | 86 | 86 | 86 |
Number of tRNAs | 37 | 37 | 37 |
Number of rRNAs | 8 | 8 | 8 |
IR duplication gene | 17 | 17 | 17 |
Overall GC content (%) | 35.7 | 35.8 | 35.7 |
GC content in LSC (%) | 33.8 | 34.1 | 33.8 |
GC content in SSC (%) | 28.6 | 29 | 29.4 |
GC content in IR (%) | 42.3 | 41.5 | 41.4 |
GenBank number | MN972442 | MN972441 | MW628970 |