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Table 1 Oleosin family genes identified in six Euphorbiaceae plants

From: Genomic insights into lineage-specific evolution of the oleosin family in Euphorbiaceae

Gene name

Locus name

Position

EST hits

AA

MW (kDa)

pI

AI

GRAVY

Oleosin location

Comment

JcOLE1

JCGZ_05847

Scaffold1855:288075..288870(+)

4

163

17.55

10.07

108.40

0.465

37..149

 

JcOLE2

JCGZ_26302

Scaffold906:2378948..2379800(+)

146

137

14.28

9.65

108.91

0.399

17..129

 

JcOLE3

JCGZ_07714

Scaffold211:4432780..4433488(−)

3

146

15.73

9.30

97.05

0.334

20..132

 

JcOLE4

JCGZ_10267

Scaffold27:1667720..1668854(+)

92

155

16.61

9.99

108.84

0.250

32..144

 

JcOLE5

JCGZ_11426

Scaffold328:794613..795414(+)

37

147

15.58

10.09

103.54

0.354

26..138

 

RcOLE1

30,174.t000125

Scaffold30174:2548082..2548991(−)

198

169

18.53

9.86

91.83

0.224

43..155

 

RcOLE2

30,147.t000604

Scaffold30147:1397782..1399509(+)

2

138

14.48

10.11

108.19

0.381

17..129

 

RcOLE3

29,794.t000071

Scaffold29794:410823..411544(−)

1

148

15.83

9.44

93.65

0.326

20..132

Mis-annotated

RcOLE4

29,917.t000061

Scaffold29917:392657..393518(−)

62

153

16.29

9.74

93.14

0.131

31..142

 

RcOLE5

30,147.t000162

Scaffold30147:3161936..3162665(+)

6

141

14.96

10.96

107.87

0.322

21..133

 

VfOLE1

–

Scaffold726:116795..117934(+)

0

170

18.31

9.84

107.64

0.231

39..151

 

VfOLE2

–

Scaffold52:288433..290739(+)

88

134

14.00

9.98

104.60

0.397

17..129

 

VfOLE3

–

Scaffold468:163522..164278(−)

1

147

15.73

8.75

96.34

0.261

20..132

 

VfOLE4

–

Scaffold141:355782..356246(−)

18

152

16.18

9.93

104.48

0.152

31..143

 

VfOLE5

–

Scaffold9:357159..358127(+)

22

148

15.65

10.21

93.76

0.303

32..144

 

MaOLE1

–

Scaffold76975:68..614(−)

0

170

18.31

9.84

89.00

0.231

44..156

 

MaOLE2

–

Scaffold5360:5948..6436(+)

0

134

14.00

9.98

94.70

0.397

15..127

 

MaOLE3

–

Scaffold13777:6055.. 6498(+)

0

147

15.73

8.75

88.44

0.261

19..131

 

MaOLE4

–

Scaffold75566:1..452(−)

0

152

16.18

9.93

92.43

0.152

29..141

 

MaOLE5

–

Scaffold64893:268..714(+)

0

148

15.65

10.21

98.85

0.303

23..134

 

MeOLE1a

Manes.01G021400

Chr01:3581610..3582383(−)

5

200

21.72

10.00

113.85

0.451

74..186

Mis-annotated

MeOLE1b

Manes.05G118400

Chr05:11792103..11792947(+)

0

160

17.32

9.74

103.69

0.413

34..146

 

MeOLE2a

Manes.06G131000

Chr06:23786505..23787260(−)

0

135

14.10

9.90

114.96

0.479

18..130

 

MeOLE2b

Manes.14G039100

Chr14:3104201..3105039(+)

0

138

14.44

9.61

113.84

0.408

18..130

 

MeOLE3

Manes.16G076500

Chr16:23230952..23231602(+)

0

150

16.22

9.34

106.73

0.293

21..133

 

MeOLE4a

Manes.15G149800

Chr15:11772517..11772972(−)

0

151

16.23

7.97

103.38

0.322

26..138

 

MeOLE4b

Manes.17G112800

Chr17:25320073..25320540(+)

0

155

16.40

9.81

102.65

0.255

32..144

 

MeOLE5

Manes.06G108600

Chr06:21806141..21806626(−)

0

161

16.82

9.89

94.53

0.136

30..142

 

HbOLE1a

Scaffold2159_36666

Scaffold2159:36264..37302(+)

1

160

17.34

9.81

106.00

0.417

34..146

 

HbOLE1b

Scaffold1416_98900

Scaffold1416:98659..99141(−)

0

160

17.45

9.48

109.19

0.475

34..146

 

HbOLE2a

Scaffold0426_909621

Scaffold0426:909292..910191(+)

0

139

14.42

9.80

113.02

0.386

18..130

 

HbOLE2b

Scaffold0426_939203

Scaffold0426:939051..939883(−)

0

138

14.23

9.87

119.57

0.515

18..130

 

HbOLE3

Scaffold0359_76313

Scaffold0359:75823..76778(+)

0

148

15.99

9.43

94.26

0.218

20..132

 

–

–

Scaffold0241:224753..224879(+)

–

–

–

–

 

–

–

Pseudogene

–

–

Scaffold0154:1876201..1876327(−)

–

–

–

–

 

–

–

Pseudogene

HbOLE4a

Scaffold0980_8021

Scaffold0980:7788..8255(−)

0

152

16.06

9.79

107.11

0.267

32..144

 

HbOLE4b

Scaffold0021_307720

Scaffold0021:307491..307949(+)

0

155

16.68

9.87

106.32

0.220

32..144

 

HbOLE5

–

Scaffold0103:1654178..1654969(−)

0

156

16.46

10.00

98.72

0.184

30..142

Not annotated

–

–

Scaffold1060:139545..139952(−)

–

–

–

–

 

–

–

Pseudogene