From: Genomic insights into lineage-specific evolution of the oleosin family in Euphorbiaceae
Gene name | Locus name | Position | EST hits | AA | MW (kDa) | pI | AI | GRAVY | Oleosin location | Comment |
---|---|---|---|---|---|---|---|---|---|---|
JcOLE1 | JCGZ_05847 | Scaffold1855:288075..288870(+) | 4 | 163 | 17.55 | 10.07 | 108.40 | 0.465 | 37..149 | Â |
JcOLE2 | JCGZ_26302 | Scaffold906:2378948..2379800(+) | 146 | 137 | 14.28 | 9.65 | 108.91 | 0.399 | 17..129 | Â |
JcOLE3 | JCGZ_07714 | Scaffold211:4432780..4433488(−) | 3 | 146 | 15.73 | 9.30 | 97.05 | 0.334 | 20..132 |  |
JcOLE4 | JCGZ_10267 | Scaffold27:1667720..1668854(+) | 92 | 155 | 16.61 | 9.99 | 108.84 | 0.250 | 32..144 | Â |
JcOLE5 | JCGZ_11426 | Scaffold328:794613..795414(+) | 37 | 147 | 15.58 | 10.09 | 103.54 | 0.354 | 26..138 | Â |
RcOLE1 | 30,174.t000125 | Scaffold30174:2548082..2548991(−) | 198 | 169 | 18.53 | 9.86 | 91.83 | 0.224 | 43..155 |  |
RcOLE2 | 30,147.t000604 | Scaffold30147:1397782..1399509(+) | 2 | 138 | 14.48 | 10.11 | 108.19 | 0.381 | 17..129 | Â |
RcOLE3 | 29,794.t000071 | Scaffold29794:410823..411544(−) | 1 | 148 | 15.83 | 9.44 | 93.65 | 0.326 | 20..132 | Mis-annotated |
RcOLE4 | 29,917.t000061 | Scaffold29917:392657..393518(−) | 62 | 153 | 16.29 | 9.74 | 93.14 | 0.131 | 31..142 |  |
RcOLE5 | 30,147.t000162 | Scaffold30147:3161936..3162665(+) | 6 | 141 | 14.96 | 10.96 | 107.87 | 0.322 | 21..133 | Â |
VfOLE1 | – | Scaffold726:116795..117934(+) | 0 | 170 | 18.31 | 9.84 | 107.64 | 0.231 | 39..151 |  |
VfOLE2 | – | Scaffold52:288433..290739(+) | 88 | 134 | 14.00 | 9.98 | 104.60 | 0.397 | 17..129 |  |
VfOLE3 | – | Scaffold468:163522..164278(−) | 1 | 147 | 15.73 | 8.75 | 96.34 | 0.261 | 20..132 |  |
VfOLE4 | – | Scaffold141:355782..356246(−) | 18 | 152 | 16.18 | 9.93 | 104.48 | 0.152 | 31..143 |  |
VfOLE5 | – | Scaffold9:357159..358127(+) | 22 | 148 | 15.65 | 10.21 | 93.76 | 0.303 | 32..144 |  |
MaOLE1 | – | Scaffold76975:68..614(−) | 0 | 170 | 18.31 | 9.84 | 89.00 | 0.231 | 44..156 |  |
MaOLE2 | – | Scaffold5360:5948..6436(+) | 0 | 134 | 14.00 | 9.98 | 94.70 | 0.397 | 15..127 |  |
MaOLE3 | – | Scaffold13777:6055.. 6498(+) | 0 | 147 | 15.73 | 8.75 | 88.44 | 0.261 | 19..131 |  |
MaOLE4 | – | Scaffold75566:1..452(−) | 0 | 152 | 16.18 | 9.93 | 92.43 | 0.152 | 29..141 |  |
MaOLE5 | – | Scaffold64893:268..714(+) | 0 | 148 | 15.65 | 10.21 | 98.85 | 0.303 | 23..134 |  |
MeOLE1a | Manes.01G021400 | Chr01:3581610..3582383(−) | 5 | 200 | 21.72 | 10.00 | 113.85 | 0.451 | 74..186 | Mis-annotated |
MeOLE1b | Manes.05G118400 | Chr05:11792103..11792947(+) | 0 | 160 | 17.32 | 9.74 | 103.69 | 0.413 | 34..146 | Â |
MeOLE2a | Manes.06G131000 | Chr06:23786505..23787260(−) | 0 | 135 | 14.10 | 9.90 | 114.96 | 0.479 | 18..130 |  |
MeOLE2b | Manes.14G039100 | Chr14:3104201..3105039(+) | 0 | 138 | 14.44 | 9.61 | 113.84 | 0.408 | 18..130 | Â |
MeOLE3 | Manes.16G076500 | Chr16:23230952..23231602(+) | 0 | 150 | 16.22 | 9.34 | 106.73 | 0.293 | 21..133 | Â |
MeOLE4a | Manes.15G149800 | Chr15:11772517..11772972(−) | 0 | 151 | 16.23 | 7.97 | 103.38 | 0.322 | 26..138 |  |
MeOLE4b | Manes.17G112800 | Chr17:25320073..25320540(+) | 0 | 155 | 16.40 | 9.81 | 102.65 | 0.255 | 32..144 | Â |
MeOLE5 | Manes.06G108600 | Chr06:21806141..21806626(−) | 0 | 161 | 16.82 | 9.89 | 94.53 | 0.136 | 30..142 |  |
HbOLE1a | Scaffold2159_36666 | Scaffold2159:36264..37302(+) | 1 | 160 | 17.34 | 9.81 | 106.00 | 0.417 | 34..146 | Â |
HbOLE1b | Scaffold1416_98900 | Scaffold1416:98659..99141(−) | 0 | 160 | 17.45 | 9.48 | 109.19 | 0.475 | 34..146 |  |
HbOLE2a | Scaffold0426_909621 | Scaffold0426:909292..910191(+) | 0 | 139 | 14.42 | 9.80 | 113.02 | 0.386 | 18..130 | Â |
HbOLE2b | Scaffold0426_939203 | Scaffold0426:939051..939883(−) | 0 | 138 | 14.23 | 9.87 | 119.57 | 0.515 | 18..130 |  |
HbOLE3 | Scaffold0359_76313 | Scaffold0359:75823..76778(+) | 0 | 148 | 15.99 | 9.43 | 94.26 | 0.218 | 20..132 | Â |
– | – | Scaffold0241:224753..224879(+) | – | – | – | – |  | – | – | Pseudogene |
– | – | Scaffold0154:1876201..1876327(−) | – | – | – | – |  | – | – | Pseudogene |
HbOLE4a | Scaffold0980_8021 | Scaffold0980:7788..8255(−) | 0 | 152 | 16.06 | 9.79 | 107.11 | 0.267 | 32..144 |  |
HbOLE4b | Scaffold0021_307720 | Scaffold0021:307491..307949(+) | 0 | 155 | 16.68 | 9.87 | 106.32 | 0.220 | 32..144 | Â |
HbOLE5 | – | Scaffold0103:1654178..1654969(−) | 0 | 156 | 16.46 | 10.00 | 98.72 | 0.184 | 30..142 | Not annotated |
– | – | Scaffold1060:139545..139952(−) | – | – | – | – |  | – | – | Pseudogene |