Table 1 List of basic information on the 59 MsPLDs identified in this study
Gene name | Sequence ID | chromosome | Coordinate (5′-3′) | Protein | Subcellular localization | ||
|---|---|---|---|---|---|---|---|
Length(aa) | pI | MW(kDa) | |||||
MsPLD01 | MS.gene005281.t1 | chr1.1 | 61,898,320:61,912,172 | 1125 | 5.92 | 128.59 | Cytoplasm; Vacuole |
MsPLD02 | MS.gene40819.t1 | chr1.2 | 59,800,826:59,811,385 | 1117 | 5.9 | 127.60 | Cytoplasm |
MsPLD03 | MS.gene23949.t1 | chr2.1 | 1,902,252:1,906,851 | 667 | 5.7 | 75.88 | Endoplasmic reticulum; Vacuole |
MsPLD04 | MS.gene00253.t1 | chr2.1 | 57,314,352:57,332,263 | 1120 | 6.3 | 126.94 | Cytoplasm |
MsPLD05 | MS.gene36409.t1 | chr2.2 | 2,872,450:2,875,877 | 756 | 6.17 | 86.76 | Cytoplasm |
MsPLD06 | MS.gene071874.t1 | chr2.2 | 53,276,118:53,293,622 | 1119 | 6.34 | 126.87 | Cytoplasm |
MsPLD07 | MS.gene86393.t1 | chr2.3 | 1,344,450:1,349,273 | 809 | 5.5 | 92.04 | Endoplasmic reticulum; Vacuole |
MsPLD08 | MS.gene057038.t1 | chr2.3 | 3,388,802:3,392,217 | 756 | 6.17 | 86.76 | Cytoplasm |
MsPLD09 | MS.gene057037.t1 | chr2.3 | 3,400,729:3,404,144 | 756 | 6.17 | 86.76 | Cytoplasm |
MsPLD10 | MS.gene50038.t1 | chr2.3 | 3,502,248:3,505,676 | 756 | 6.24 | 86.80 | Cytoplasm |
MsPLD11 | MS.gene67327.t1 | chr2.3 | 55,372,147:55,389,928 | 1119 | 6.3 | 126.81 | Cytoplasm |
MsPLD12 | MS.gene067395.t1 | chr2.4 | 1,784,846:1,789,476 | 809 | 5.5 | 92.04 | Endoplasmic reticulum; Vacuole |
MsPLD13 | MS.gene89026.t1 | chr2.4 | 1,858,953:1,863,743 | 809 | 5.5 | 92.02 | Endoplasmic reticulum; Vacuole |
MsPLD14 | MS.gene85200.t1 | chr2.4 | 4,122,792:4,126,221 | 756 | 6.17 | 86.73 | Cytoplasm |
MsPLD15 | MS.gene038940.t1 | chr2.4 | 55,568,036:55,587,627 | 1119 | 6.26 | 126.82 | Cytoplasm |
MsPLD16 | MS.gene32629.t1 | chr3.1 | 84,952,195:84,955,138 | 783 | 6.37 | 88.92 | Endoplasmic reticulum; Vacuole |
MsPLD17 | MS.gene32627.t1 | chr3.1 | 84,968,523:84,971,756 | 825 | 5.92 | 93.83 | Endoplasmic reticulum; Vacuole |
MsPLD18 | MS.gene52800.t1 | chr3.1 | 90,894,759:90,901,718 | 851 | 8.31 | 96.65 | Cytoplasm |
MsPLD19 | MS.gene072896.t1 | chr3.2 | 87,203,145:87,206,378 | 825 | 5.92 | 93.83 | Endoplasmic reticulum; Vacuole |
MsPLD20 | MS.gene072894.t1 | chr3.2 | 87,219,454:87,222,732 | 826 | 6.46 | 93.45 | Endoplasmic reticulum; Vacuole |
MsPLD21 | MS.gene014379.t1 | chr3.2 | 90,761,398:90,768,367 | 851 | 8.19 | 96.73 | Cytoplasm |
MsPLD22 | MS.gene014832.t1 | chr3.3 | 87,825,233:87,828,519 | 826 | 6.24 | 93.47 | Endoplasmic reticulum; Vacuole |
MsPLD23 | MS.gene014830.t1 | chr3.3 | 87,840,038:87,843,321 | 825 | 6.01 | 93.84 | Endoplasmic reticulum; Vacuole |
MsPLD24 | MS.gene69358.t1 | chr3.3 | 93,688,962:93,695,958 | 851 | 8.19 | 96.70 | Cytoplasm |
MsPLD25 | MS.gene67061.t1 | chr3.4 | 93,241,223:93,245,494 | 796 | 6.59 | 90.01 | Endoplasmic reticulum; Vacuole |
MsPLD26 | MS.gene67059.t1 | chr3.4 | 93,258,522:93,262,462 | 825 | 5.92 | 93.83 | Endoplasmic reticulum; Vacuole |
MsPLD27 | MS.gene064799.t1 | chr3.4 | 98,282,304:98,289,298 | 851 | 8.19 | 96.70 | Cytoplasm |
MsPLD28 | MS.gene026763.t1 | chr4.1 | 85,441,869:85,445,416 | 808 | 5.58 | 91.68 | Endoplasmic reticulum; Vacuole |
MsPLD29 | MS.gene47888.t1 | chr4.1 | 11,906,321:11,909,993 | 828 | 7.22 | 93.51 | Cytoplasm |
MsPLD30 | MS.gene75365.t1 | chr4.2 | 89,727,307:89,730,857 | 808 | 5.54 | 91.58 | Endoplasmic reticulum; Vacuole |
MsPLD31 | MS.gene030945.t1 | chr4.3 | 11,556,291:11,559,963 | 828 | 7.22 | 93.51 | Cytoplasm |
MsPLD32 | MS.gene052137.t1 | chr4.3 | 11,572,534:11,576,203 | 828 | 7.22 | 93.51 | Cytoplasm |
MsPLD33 | MS.gene052138.t1 | chr4.3 | 11,585,594:11,589,266 | 828 | 7.22 | 93.51 | Cytoplasm |
MsPLD34 | MS.gene052139.t1 | chr4.3 | 11,597,424:11,600,973 | 787 | 8.19 | 89.17 | Cytoplasm |
MsPLD35 | MS.gene030946.t1 | chr4.3 | 11,612,495:11,616,167 | 828 | 7.22 | 93.51 | Cytoplasm |
MsPLD36 | MS.gene60041.t1 | chr4.3 | 86,121,962:86,125,511 | 808 | 5.58 | 91.68 | Endoplasmic reticulum; Vacuole |
MsPLD37 | MS.gene27931.t1 | chr4.4 | 12,348,219:12,351,956 | 828 | 7.07 | 93.57 | Cytoplasm |
MsPLD38 | MS.gene034074.t1 | chr4.4 | 88,855,262:88,858,802 | 808 | 5.62 | 91.68 | Endoplasmic reticulum; Vacuole |
MsPLD39 | MS.gene64823.t1 | chr5.1 | 13,898,847:13,907,069 | 869 | 6.67 | 98.53 | Cytoplasm |
MsPLD40 | MS.gene20350.t1 | chr5.1 | 4,652,023:4,656,053 | 800 | 7.85 | 90.53 | Cytoplasm |
MsPLD41 | MS.gene20351.t1 | chr5.1 | 4,658,972:4,663,281 | 848 | 7.02 | 95.59 | Cytoplasm |
MsPLD42 | MS.gene22597.t1 | chr5.2 | 3,876,181:3,880,214 | 800 | 7.35 | 90.48 | Cytoplasm |
MsPLD43 | MS.gene22596.t1 | chr5.2 | 3,882,132:3,887,090 | 802 | 6.88 | 90.62 | Cytoplasm |
MsPLD44 | MS.gene67570.t1 | chr5.2 | 14,035,406:14,043,438 | 869 | 6.59 | 98.54 | Cytoplasm |
MsPLD45 | MS.gene67512.t1 | chr5.2 | 14,068,746:14,076,357 | 607 | 6.24 | 68.53 | Cytoplasm |
MsPLD46 | MS.gene025734.t1 | chr5.3 | 4,671,633:4,675,827 | 854 | 7.18 | 96.32 | Cytoplasm |
MsPLD47 | MS.gene025735.t1 | chr5.3 | 4,677,864:4,682,196 | 848 | 6.69 | 95.58 | Cytoplasm |
MsPLD48 | MS.gene063676.t1 | chr5.3 | 13,420,601:13,428,164 | 869 | 6.67 | 98.52 | Cytoplasm |
MsPLD49 | MS.gene015516.t1 | chr5.4 | 5,638,597:5,642,787 | 862 | 7.62 | 97.22 | Cytoplasm |
MsPLD50 | MS.gene015515.t1 | chr5.4 | 5,644,824:5,649,159 | 848 | 6.77 | 95.57 | Cytoplasm |
MsPLD51 | MS.gene42387.t1 | chr7.1 | 27,281,427:27,286,953 | 1112 | 7.57 | 124.38 | Cytoplasm |
MsPLD52 | MS.gene27622.t1 | chr7.2 | 29,824,181:29,829,710 | 1113 | 7.57 | 124.47 | Chloroplast; Cytoplasm |
MsPLD53 | MS.gene42212.t1 | chr7.3 | 29,807,554:29,813,088 | 1113 | 7.57 | 124.44 | Chloroplast; Cytoplasm |
MsPLD54 | MS.gene96040.t1 | chr7.4 | 29,490,914:29,496,124 | 995 | 7.96 | 111.18 | Cytoplasm |
MsPLD55 | MS.gene019429.t1 | chr8.1 | 68,377,847:68,384,748 | 1045 | 6.67 | 117.16 | Chloroplast; Cytoplasm |
MsPLD56 | MS.gene072112.t1 | chr8.1 | 81,395,694:81,405,783 | 921 | 5.8 | 106.32 | Cytoplasm; Vacuole |
MsPLD57 | MS.gene36927.t1 | chr8.2 | 64,475,923:64,482,575 | 1047 | 6.67 | 117.35 | Chloroplast; Cytoplasm |
MsPLD58 | MS.gene37538.t1 | chr8.3 | 60,823,389:60,830,276 | 1049 | 6.68 | 117.65 | Chloroplast; Cytoplasm |
MsPLD59 | MS.gene63691.t1 | chr8.4 | 62,837,893:62,844,731 | 1028 | 6.72 | 115.28 | Chloroplast; Cytoplasm |