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Table 3 253 gene triplets: predicted CDSs found in databases

From: Identifying genes with conserved splicing structure and orthologous isoforms in human, mouse and dog

Species

Human

Mouse

Dog

Number of predicted transcripts

180

249

600

Found in Ensembl 96 data

27

43

0

Found in Ensembl 98 data

+2

+1

+183

Found in Ensembl 102 data

+0

+1

+0

Found in Ensembl 103 data

+3

-

+0

Found in XBSeq data

+8

+5

-

Found in UCSC data

+2

+1

+0

Found in FEELnc data

-

-

+74

Total of found CDSs

42

51

257

 

23.3%

20.5%

42.8%