Type | Species | Number of CDSs | Average Similarity | Number of Gaps | |||||
---|---|---|---|---|---|---|---|---|---|
δ12 | δ13 | δ23 | δ | MAX | MIN | ||||
Real CDSs (FrameAlign) | H. sapiens | 71,853 | 0.492 ± 0.043 | 0.472 ± 0.044 | 0.434 ± 0.040 | 0.466 ± 0.029 | 0.713 | 0.194 | 2 |
P. troglodytes | 15,781 | 0.491 ± 0.046 | 0.468 ± 0.046 | 0.431 ± 0.042 | 0.463 ± 0.030 | 0.625 | 0.311 | 2 | |
M. musculus | 27,208 | 0.484 ± 0.046 | 0.469 ± 0.042 | 0.426 ± 0.040 | 0.460 ± 0.029 | 0.739 | 0.286 | 2 | |
X. tropicalis | 7706 | 0.481 ± 0.042 | 0.481 ± 0.041 | 0.439 ± 0.037 | 0.467 ± 0.028 | 0.644 | 0.353 | 2 | |
D. rerio | 14,151 | 0.471 ± 0.044 | 0.468 ± 0.040 | 0.408 ± 0.040 | 0.449 ± 0.030 | 0.614 | 0.314 | 2 | |
D. melanogaster | 23,936 | 0.475 ± 0.046 | 0.457 ± 0.044 | 0.362 ± 0.047 | 0.431 ± 0.030 | 0.689 | 0.236 | 2 | |
C. elegans | 29,227 | 0.450 ± 0.047 | 0.475 ± 0.045 | 0.421 ± 0.043 | 0.449 ± 0.032 | 0.634 | 0.224 | 2 | |
A. thaliana | 35,378 | 0.442 ± 0.045 | 0.477 ± 0.044 | 0.412 ± 0.041 | 0.444 ± 0.031 | 0.882 | 0.244 | 2 | |
S. cerevisiae | 5889 | 0.461 ± 0.041 | 0.510 ± 0.042 | 0.423 ± 0.038 | 0.465 ± 0.029 | 0.692 | 0.259 | 2 | |
E.coli | 4140 | 0.435 ± 0.046 | 0.426 ± 0.047 | 0.372 ± 0.043 | 0.411 ± 0.030 | 0.571 | 0.237 | 2 | |
Average | 235,269 | 0.468 ± 0.045 | 0.470 ± 0.043 | 0.413 ± 0.041 | 0.450 ± 0.030 | 0.882a | 0.194a | 2 | |
Random CDSs (FrameAlign) | Three frames | 100,000 | 0.394 ± 0.028 | 0.394 ± 0.028 | 0.395 ± 0.028 | 0.394 ± 0.016 | 0.477 | 0.330 | 2 |
Three random CDSs | 100000 × 3 | 0.383 ± 0.028 | 0.383 ± 0.028 | 0.383 ± 0.028 | 0.383 ± 0.018 | 0.458 | 0.304 | 0 |